Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.72■□□□□ 0.59
URB1O60287 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
URB1O60287 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.72■□□□□ 0.59
URB1O60287 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.72■□□□□ 0.59
URB1O60287 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.72■□□□□ 0.59
URB1O60287 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.72■□□□□ 0.59
URB1O60287 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.72■□□□□ 0.59
URB1O60287 AC023632.3-201ENST00000521633 145 ntBASIC18.72■□□□□ 0.59
URB1O60287 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.72■□□□□ 0.59
URB1O60287 AC139887.4-201ENST00000607877 719 ntBASIC18.72■□□□□ 0.59
URB1O60287 AL445675.2-201ENST00000620291 557 ntBASIC18.72■□□□□ 0.59
URB1O60287 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
URB1O60287 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.72■□□□□ 0.59
URB1O60287 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
URB1O60287 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
URB1O60287 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
URB1O60287 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
URB1O60287 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
URB1O60287 INGX-201ENST00000359239 846 ntBASIC18.71■□□□□ 0.59
URB1O60287 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.71■□□□□ 0.59
URB1O60287 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.71■□□□□ 0.59
URB1O60287 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
URB1O60287 AL138966.2-201ENST00000621997 464 ntBASIC18.71■□□□□ 0.59
URB1O60287 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
URB1O60287 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
URB1O60287 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
URB1O60287 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
URB1O60287 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.71■□□□□ 0.59
URB1O60287 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
URB1O60287 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
URB1O60287 MESTP1-201ENST00000404287 994 ntBASIC18.71■□□□□ 0.59
URB1O60287 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
URB1O60287 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.71■□□□□ 0.59
URB1O60287 SLC25A1P4-201ENST00000567977 778 ntBASIC18.71■□□□□ 0.59
URB1O60287 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.71■□□□□ 0.59
URB1O60287 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
URB1O60287 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.71■□□□□ 0.59
URB1O60287 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
URB1O60287 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
URB1O60287 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
URB1O60287 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
URB1O60287 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
URB1O60287 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
URB1O60287 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.7■□□□□ 0.58
URB1O60287 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.7■□□□□ 0.58
URB1O60287 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
URB1O60287 FAM86EP-206ENST00000510506 987 ntBASIC18.7■□□□□ 0.58
URB1O60287 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
URB1O60287 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
URB1O60287 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
URB1O60287 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.7■□□□□ 0.58
URB1O60287 AC133561.1-201ENST00000568600 2415 ntBASIC18.7■□□□□ 0.58
URB1O60287 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
URB1O60287 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.7■□□□□ 0.58
URB1O60287 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
URB1O60287 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.7■□□□□ 0.58
URB1O60287 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.7■□□□□ 0.58
URB1O60287 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.7■□□□□ 0.58
URB1O60287 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.7■□□□□ 0.58
URB1O60287 AC011558.1-201ENST00000623459 338 ntBASIC18.7■□□□□ 0.58
URB1O60287 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
URB1O60287 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
URB1O60287 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
URB1O60287 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
URB1O60287 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
URB1O60287 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
URB1O60287 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.69■□□□□ 0.58
URB1O60287 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.69■□□□□ 0.58
URB1O60287 AC092647.4-201ENST00000457211 535 ntBASIC18.69■□□□□ 0.58
URB1O60287 AC128688.1-201ENST00000487626 519 ntBASIC18.69■□□□□ 0.58
URB1O60287 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
URB1O60287 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
URB1O60287 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
URB1O60287 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
URB1O60287 AC127496.7-201ENST00000625110 1798 ntBASIC18.69■□□□□ 0.58
URB1O60287 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
URB1O60287 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
URB1O60287 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
URB1O60287 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.69■□□□□ 0.58
URB1O60287 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
URB1O60287 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
URB1O60287 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
URB1O60287 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.69■□□□□ 0.58
URB1O60287 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.69■□□□□ 0.58
URB1O60287 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
URB1O60287 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms