Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MSI1O43347 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.6■□□□□ 0.89
MSI1O43347 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MSI1O43347 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.6■□□□□ 0.89
MSI1O43347 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MSI1O43347 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MSI1O43347 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.6■□□□□ 0.89
MSI1O43347 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.6■□□□□ 0.89
MSI1O43347 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.6■□□□□ 0.89
MSI1O43347 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.6■□□□□ 0.89
MSI1O43347 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MSI1O43347 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MSI1O43347 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MSI1O43347 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.6■□□□□ 0.89
MSI1O43347 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.6■□□□□ 0.89
MSI1O43347 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.6■□□□□ 0.89
MSI1O43347 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MSI1O43347 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
MSI1O43347 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MSI1O43347 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.59■□□□□ 0.89
MSI1O43347 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSI1O43347 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSI1O43347 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
MSI1O43347 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
MSI1O43347 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSI1O43347 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.59■□□□□ 0.89
MSI1O43347 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
MSI1O43347 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSI1O43347 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSI1O43347 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MSI1O43347 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MSI1O43347 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MSI1O43347 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.59■□□□□ 0.89
MSI1O43347 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.59■□□□□ 0.89
MSI1O43347 PCDHAC2-203ENST00000615316 3011 ntBASIC20.59■□□□□ 0.89
MSI1O43347 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.59■□□□□ 0.89
MSI1O43347 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSI1O43347 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.59■□□□□ 0.89
MSI1O43347 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSI1O43347 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSI1O43347 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.58■□□□□ 0.89
MSI1O43347 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSI1O43347 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.58■□□□□ 0.89
MSI1O43347 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSI1O43347 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.58■□□□□ 0.89
MSI1O43347 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSI1O43347 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSI1O43347 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.58■□□□□ 0.89
MSI1O43347 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSI1O43347 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
MSI1O43347 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
MSI1O43347 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.58■□□□□ 0.89
MSI1O43347 AC133681.1-201ENST00000465482 601 ntBASIC20.58■□□□□ 0.89
MSI1O43347 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.58■□□□□ 0.89
MSI1O43347 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSI1O43347 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.58■□□□□ 0.89
MSI1O43347 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSI1O43347 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.58■□□□□ 0.89
MSI1O43347 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.58■□□□□ 0.89
MSI1O43347 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.58■□□□□ 0.88
MSI1O43347 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MSI1O43347 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
MSI1O43347 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MSI1O43347 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MSI1O43347 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.57■□□□□ 0.88
MSI1O43347 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.57■□□□□ 0.88
MSI1O43347 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MSI1O43347 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
MSI1O43347 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSI1O43347 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.57■□□□□ 0.88
MSI1O43347 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.57■□□□□ 0.88
MSI1O43347 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
MSI1O43347 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.57■□□□□ 0.88
MSI1O43347 AC093827.2-201ENST00000512654 315 ntBASIC20.57■□□□□ 0.88
MSI1O43347 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.57■□□□□ 0.88
MSI1O43347 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.57■□□□□ 0.88
MSI1O43347 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSI1O43347 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
MSI1O43347 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSI1O43347 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MSI1O43347 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSI1O43347 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSI1O43347 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.56■□□□□ 0.88
MSI1O43347 NBPF21P-201ENST00000425093 1451 ntBASIC20.56■□□□□ 0.88
MSI1O43347 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
MSI1O43347 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MSI1O43347 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSI1O43347 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MSI1O43347 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.56■□□□□ 0.88
MSI1O43347 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSI1O43347 TFP1-202ENST00000475455 1573 ntBASIC20.56■□□□□ 0.88
MSI1O43347 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
MSI1O43347 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSI1O43347 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.56■□□□□ 0.88
MSI1O43347 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.56■□□□□ 0.88
MSI1O43347 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.56■□□□□ 0.88
MSI1O43347 AC110285.5-201ENST00000611501 352 ntBASIC20.56■□□□□ 0.88
MSI1O43347 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.56■□□□□ 0.88
MSI1O43347 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
MSI1O43347 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms