Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.31■■□□□ 1.16
DDX39AO00148 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
DDX39AO00148 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
DDX39AO00148 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
DDX39AO00148 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.3■■□□□ 1.16
DDX39AO00148 AC018553.1-201ENST00000616682 1458 ntBASIC22.3■■□□□ 1.16
DDX39AO00148 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
DDX39AO00148 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.3■■□□□ 1.16
DDX39AO00148 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
DDX39AO00148 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
DDX39AO00148 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
DDX39AO00148 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
DDX39AO00148 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
DDX39AO00148 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
DDX39AO00148 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
DDX39AO00148 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
DDX39AO00148 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
DDX39AO00148 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.3■■□□□ 1.16
DDX39AO00148 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
DDX39AO00148 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.3■■□□□ 1.16
DDX39AO00148 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DDX39AO00148 PHGDH-210ENST00000641115 1638 ntBASIC22.29■■□□□ 1.16
DDX39AO00148 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.29■■□□□ 1.16
DDX39AO00148 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
DDX39AO00148 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.29■■□□□ 1.16
DDX39AO00148 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
DDX39AO00148 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
DDX39AO00148 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.29■■□□□ 1.16
DDX39AO00148 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
DDX39AO00148 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.29■■□□□ 1.16
DDX39AO00148 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.29■■□□□ 1.16
DDX39AO00148 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
DDX39AO00148 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DDX39AO00148 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DDX39AO00148 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
DDX39AO00148 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DDX39AO00148 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
DDX39AO00148 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
DDX39AO00148 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
DDX39AO00148 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DDX39AO00148 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.28■■□□□ 1.16
DDX39AO00148 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DDX39AO00148 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
DDX39AO00148 MIR718-201ENST00000390190 70 ntBASIC22.28■■□□□ 1.16
DDX39AO00148 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.28■■□□□ 1.16
DDX39AO00148 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DDX39AO00148 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC22.28■■□□□ 1.16
DDX39AO00148 AC116351.2-201ENST00000606540 1585 ntBASIC22.28■■□□□ 1.16
DDX39AO00148 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
DDX39AO00148 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DDX39AO00148 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
DDX39AO00148 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
DDX39AO00148 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.27■■□□□ 1.16
DDX39AO00148 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.27■■□□□ 1.16
DDX39AO00148 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
DDX39AO00148 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
DDX39AO00148 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX39AO00148 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX39AO00148 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX39AO00148 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
DDX39AO00148 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DDX39AO00148 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.27■■□□□ 1.16
DDX39AO00148 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
DDX39AO00148 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.27■■□□□ 1.16
DDX39AO00148 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
DDX39AO00148 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
DDX39AO00148 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.27■■□□□ 1.16
DDX39AO00148 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
DDX39AO00148 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC22.27■■□□□ 1.16
DDX39AO00148 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
DDX39AO00148 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.27■■□□□ 1.15
DDX39AO00148 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
DDX39AO00148 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX39AO00148 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX39AO00148 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.26■■□□□ 1.15
DDX39AO00148 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.26■■□□□ 1.15
DDX39AO00148 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX39AO00148 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX39AO00148 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
DDX39AO00148 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX39AO00148 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX39AO00148 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX39AO00148 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX39AO00148 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX39AO00148 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX39AO00148 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX39AO00148 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX39AO00148 RPS2P55-201ENST00000397318 883 ntBASIC22.26■■□□□ 1.15
DDX39AO00148 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX39AO00148 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
DDX39AO00148 SNORA78-201ENST00000459373 127 ntBASIC22.26■■□□□ 1.15
DDX39AO00148 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX39AO00148 AC107956.1-201ENST00000494359 873 ntBASIC22.26■■□□□ 1.15
DDX39AO00148 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.26■■□□□ 1.15
DDX39AO00148 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX39AO00148 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX39AO00148 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX39AO00148 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX39AO00148 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.26■■□□□ 1.15
DDX39AO00148 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 618.2 ms