Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 AC133041.1-202ENST00000642053 222 ntBASIC17.57■□□□□ 0.4
NPIPB4C9JG80 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 AL109923.1-201ENST00000618799 583 ntBASIC17.56■□□□□ 0.4
NPIPB4C9JG80 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NPIPB4C9JG80 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.55■□□□□ 0.4
NPIPB4C9JG80 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB4C9JG80 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB4C9JG80 AC092368.3-202ENST00000574180 1591 ntBASIC17.55■□□□□ 0.4
NPIPB4C9JG80 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB4C9JG80 AC069152.1-201ENST00000438030 544 ntBASIC17.55■□□□□ 0.4
NPIPB4C9JG80 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
NPIPB4C9JG80 AC083880.1-201ENST00000608266 535 ntBASIC17.55■□□□□ 0.4
NPIPB4C9JG80 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.55■□□□□ 0.4
NPIPB4C9JG80 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.55■□□□□ 0.4
NPIPB4C9JG80 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NPIPB4C9JG80 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB4C9JG80 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPB4C9JG80 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.55■□□□□ 0.4
NPIPB4C9JG80 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.55■□□□□ 0.4
NPIPB4C9JG80 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB4C9JG80 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB4C9JG80 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.54■□□□□ 0.4
NPIPB4C9JG80 PNMA6B-201ENST00000538162 1200 ntBASIC17.54■□□□□ 0.4
NPIPB4C9JG80 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 AC104771.1-201ENST00000603335 964 ntBASIC17.54■□□□□ 0.4
NPIPB4C9JG80 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.54■□□□□ 0.4
NPIPB4C9JG80 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms