Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.54■□□□□ 0.88
TRAV19A0A0A6YYK7 KRT16P1-201ENST00000399124 1418 ntBASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV19A0A0A6YYK7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 C1QL1P1-201ENST00000568105 661 ntBASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.52■□□□□ 0.88
TRAV19A0A0A6YYK7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
TRAV19A0A0A6YYK7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAV19A0A0A6YYK7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.51■□□□□ 0.87
TRAV19A0A0A6YYK7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRAV19A0A0A6YYK7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TRAV19A0A0A6YYK7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
TRAV19A0A0A6YYK7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV19A0A0A6YYK7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
TRAV19A0A0A6YYK7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAV19A0A0A6YYK7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV19A0A0A6YYK7 REXO1L10P-201ENST00000615707 1290 ntBASIC20.51■□□□□ 0.87
TRAV19A0A0A6YYK7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.51■□□□□ 0.87
TRAV19A0A0A6YYK7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRAV19A0A0A6YYK7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TRAV19A0A0A6YYK7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.51■□□□□ 0.87
TRAV19A0A0A6YYK7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV19A0A0A6YYK7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.51■□□□□ 0.87
TRAV19A0A0A6YYK7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 MMP23A-201ENST00000234610 1017 ntBASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 RBM17P1-201ENST00000453646 1190 ntBASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV19A0A0A6YYK7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV19A0A0A6YYK7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV19A0A0A6YYK7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAV19A0A0A6YYK7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV19A0A0A6YYK7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV19A0A0A6YYK7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAV19A0A0A6YYK7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV19A0A0A6YYK7 UNC93B2-201ENST00000285383 730 ntBASIC20.49■□□□□ 0.87
TRAV19A0A0A6YYK7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV19A0A0A6YYK7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms