Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 REG4-204ENST00000530654 612 ntTSL 5 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 MIR4428-201ENST00000584884 73 ntBASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RCL1Q9Y2P8 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AC025470.1-201ENST00000510053 2032 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AC023886.2-201ENST00000321285 411 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 RNA5SP176-201ENST00000390956 110 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 FTH1P26-201ENST00000406512 701 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 NIP7P1-201ENST00000433227 512 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 RPL14P5-201ENST00000436474 730 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 VPS25P1-201ENST00000455691 508 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AC112187.1-201ENST00000455837 479 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 RN7SL492P-201ENST00000460700 295 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 RN7SL91P-201ENST00000469313 291 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AC005017.1-201ENST00000482002 490 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 RPL7AP30-201ENST00000482859 796 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 RN7SL37P-201ENST00000490461 307 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 COX6B1P4-201ENST00000519826 484 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 VDAC2P2-201ENST00000544463 901 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 MIR5705-201ENST00000579870 89 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 MIR4433B-201ENST00000581329 102 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AC093635.1-201ENST00000609028 555 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AL035425.4-201ENST00000624509 1063 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 AC003992.1-201ENST00000635364 557 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 OR7E91P-202ENST00000642062 1198 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 TRIM53CP-201ENST00000531490 1354 ntBASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RCL1Q9Y2P8 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms