Protein–RNA interactions for Protein: Q9UHC1

MLH3, DNA mismatch repair protein Mlh3, humanhuman

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3Q9UHC1 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC9.14□□□□□ -0.95
MLH3Q9UHC1 AL137067.2-201ENST00000621202 131 ntBASIC9.14□□□□□ -0.95
MLH3Q9UHC1 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC9.14□□□□□ -0.95
MLH3Q9UHC1 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
MLH3Q9UHC1 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MLH3Q9UHC1 GUCY1B2-204ENST00000531898 1979 ntBASIC9.14□□□□□ -0.95
MLH3Q9UHC1 ING3-204ENST00000431467 1447 ntTSL 2 BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 RNA5SP394-201ENST00000364216 119 ntBASIC9.13□□□□□ -0.95
MLH3Q9UHC1 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 RPS15AP30-201ENST00000420976 390 ntBASIC9.13□□□□□ -0.95
MLH3Q9UHC1 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 AL133445.1-201ENST00000467051 452 ntBASIC9.13□□□□□ -0.95
MLH3Q9UHC1 SIAH1P1-201ENST00000479411 923 ntBASIC9.13□□□□□ -0.95
MLH3Q9UHC1 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 DPPA2P4-201ENST00000563717 878 ntBASIC9.13□□□□□ -0.95
MLH3Q9UHC1 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC9.13□□□□□ -0.95
MLH3Q9UHC1 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 PDZK1P1-202ENST00000425209 1350 ntBASIC9.12□□□□□ -0.95
MLH3Q9UHC1 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 RNA5SP443-201ENST00000363083 132 ntBASIC9.12□□□□□ -0.95
MLH3Q9UHC1 GAPDHP58-201ENST00000438477 1006 ntBASIC9.12□□□□□ -0.95
MLH3Q9UHC1 AC114728.1-201ENST00000488289 483 ntBASIC9.12□□□□□ -0.95
MLH3Q9UHC1 SNORA58-201ENST00000505219 137 ntBASIC9.12□□□□□ -0.95
MLH3Q9UHC1 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 IGLV2-28-201ENST00000520681 304 ntBASIC9.12□□□□□ -0.95
MLH3Q9UHC1 AC110056.1-201ENST00000525759 911 ntBASIC9.12□□□□□ -0.95
MLH3Q9UHC1 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 AC044860.2-201ENST00000561005 179 ntBASIC9.12□□□□□ -0.95
MLH3Q9UHC1 MIR4505-201ENST00000582238 73 ntBASIC9.12□□□□□ -0.95
MLH3Q9UHC1 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 AL132640.3-201ENST00000630473 177 ntBASIC9.12□□□□□ -0.95
MLH3Q9UHC1 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MLH3Q9UHC1 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 SNORA74A-201ENST00000364089 198 ntBASIC9.11□□□□□ -0.95
MLH3Q9UHC1 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 SPRYD7P1-201ENST00000443861 570 ntBASIC9.11□□□□□ -0.95
MLH3Q9UHC1 RPS17P15-201ENST00000475609 349 ntBASIC9.11□□□□□ -0.95
MLH3Q9UHC1 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
MLH3Q9UHC1 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
MLH3Q9UHC1 RN7SKP77-201ENST00000363261 353 ntBASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms