Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 AL731556.1-201ENST00000394628 3711 ntBASIC7.6□□□□□ -1.19
CLIP2Q9UDT6 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 AC010401.2-201ENST00000575137 4934 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 RNU1-46P-201ENST00000384425 164 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 RN7SKP281-201ENST00000410472 352 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 RNU4-64P-201ENST00000410795 131 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 GAPDHP34-201ENST00000432112 823 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 AL138899.2-201ENST00000439139 499 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 AC022206.1-201ENST00000495947 347 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 SNORA58-201ENST00000505219 137 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 AC122718.2-201ENST00000505325 591 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 AC018797.1-201ENST00000510791 255 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 OR51A1P-201ENST00000511110 946 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 KCTD9P4-201ENST00000526766 1166 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 RN7SL475P-201ENST00000583379 298 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 AC073046.2-201ENST00000604756 527 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 AC025171.4-201ENST00000607250 1047 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 uc_338.31-201ENST00000615595 186 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 CASC19-274ENST00000642018 970 ntBASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CLIP2Q9UDT6 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.59□□□□□ -1.2
CLIP2Q9UDT6 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 AL662795.2-201ENST00000624252 3706 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 AL353743.3-201ENST00000442109 1468 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 AL391419.1-201ENST00000398901 1275 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 RNA5SP198-201ENST00000410376 127 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 MTND2P12-201ENST00000417560 1252 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 RPL21P50-201ENST00000417698 477 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 RPL23AP85-201ENST00000421838 433 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 AC093166.3-201ENST00000448785 303 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 AC068491.1-201ENST00000449539 1241 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 RN7SL362P-201ENST00000494228 267 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 CYCSP25-201ENST00000525280 316 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 TPRX1P1-201ENST00000557620 319 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 AC005632.2-201ENST00000564271 828 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 AL078601.3-201ENST00000573303 535 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 MIR4271-201ENST00000582451 67 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 AL135999.3-201ENST00000610501 812 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 MRPL57P1-201ENST00000621486 265 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 AP000547.3-204ENST00000588548 2523 ntBASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms