Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
USP35Q9P2H5 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
USP35Q9P2H5 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
USP35Q9P2H5 LARS-212ENST00000510191 3737 ntTSL 2 BASIC9.1□□□□□ -0.95
USP35Q9P2H5 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
USP35Q9P2H5 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
USP35Q9P2H5 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
USP35Q9P2H5 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
USP35Q9P2H5 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC9.1□□□□□ -0.95
USP35Q9P2H5 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
USP35Q9P2H5 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
USP35Q9P2H5 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
USP35Q9P2H5 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
USP35Q9P2H5 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
USP35Q9P2H5 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
USP35Q9P2H5 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
USP35Q9P2H5 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 RNU6-618P-201ENST00000363518 112 ntBASIC9.09□□□□□ -0.95
USP35Q9P2H5 AC006511.2-201ENST00000388966 660 ntBASIC9.09□□□□□ -0.95
USP35Q9P2H5 SMARCE1P6-201ENST00000398372 1216 ntBASIC9.09□□□□□ -0.95
USP35Q9P2H5 AC016769.2-201ENST00000414815 475 ntBASIC9.09□□□□□ -0.95
USP35Q9P2H5 MRPS21P5-201ENST00000417885 231 ntBASIC9.09□□□□□ -0.95
USP35Q9P2H5 IPPKP1-201ENST00000422501 768 ntBASIC9.09□□□□□ -0.95
USP35Q9P2H5 SETP20-201ENST00000457046 852 ntBASIC9.09□□□□□ -0.95
USP35Q9P2H5 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 AC138409.2-202ENST00000507274 458 ntBASIC9.09□□□□□ -0.95
USP35Q9P2H5 AC095057.1-201ENST00000507583 168 ntBASIC9.09□□□□□ -0.95
USP35Q9P2H5 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 AC027281.1-201ENST00000574178 758 ntBASIC9.09□□□□□ -0.95
USP35Q9P2H5 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 AC020914.7-201ENST00000594477 545 ntBASIC9.09□□□□□ -0.95
USP35Q9P2H5 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
USP35Q9P2H5 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
USP35Q9P2H5 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
USP35Q9P2H5 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
USP35Q9P2H5 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
USP35Q9P2H5 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
USP35Q9P2H5 KARSP2-201ENST00000415696 1639 ntBASIC9.09□□□□□ -0.95
USP35Q9P2H5 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
USP35Q9P2H5 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
USP35Q9P2H5 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 ZNF658B-201ENST00000602828 3408 ntBASIC9.08□□□□□ -0.96
USP35Q9P2H5 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
USP35Q9P2H5 AL596244.1-201ENST00000567068 3779 ntBASIC9.08□□□□□ -0.96
USP35Q9P2H5 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
USP35Q9P2H5 AL353625.1-202ENST00000366273 571 ntBASIC9.08□□□□□ -0.96
USP35Q9P2H5 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
USP35Q9P2H5 RNU6-883P-201ENST00000384597 107 ntBASIC9.08□□□□□ -0.96
USP35Q9P2H5 AL589655.1-201ENST00000405398 482 ntBASIC9.08□□□□□ -0.96
USP35Q9P2H5 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
USP35Q9P2H5 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 AC099782.1-201ENST00000425889 474 ntBASIC9.08□□□□□ -0.96
USP35Q9P2H5 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 RN7SL834P-201ENST00000461450 286 ntBASIC9.08□□□□□ -0.96
USP35Q9P2H5 RPS26P24-201ENST00000497656 331 ntBASIC9.08□□□□□ -0.96
USP35Q9P2H5 PABPC1P1-201ENST00000506347 591 ntBASIC9.08□□□□□ -0.96
USP35Q9P2H5 COL6A4P2-205ENST00000509855 506 ntBASIC9.08□□□□□ -0.96
USP35Q9P2H5 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 AC120036.3-201ENST00000517826 292 ntBASIC9.08□□□□□ -0.96
USP35Q9P2H5 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 AC012146.2-201ENST00000576545 416 ntBASIC9.08□□□□□ -0.96
USP35Q9P2H5 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 AC124916.2-201ENST00000604416 224 ntBASIC9.08□□□□□ -0.96
USP35Q9P2H5 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 SNX18P12-201ENST00000624821 759 ntBASIC9.08□□□□□ -0.96
USP35Q9P2H5 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
USP35Q9P2H5 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 C1D-202ENST00000407324 1379 ntTSL 3 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 AC090771.1-201ENST00000585803 1618 ntBASIC9.08□□□□□ -0.96
USP35Q9P2H5 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
USP35Q9P2H5 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
USP35Q9P2H5 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
USP35Q9P2H5 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
USP35Q9P2H5 AC083806.2-201ENST00000617795 2685 ntBASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms