Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 STAG3L4-201ENST00000352103 530 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 RNA5SP232-201ENST00000364144 119 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 RPL7P58-201ENST00000402913 758 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AC099782.1-201ENST00000425889 474 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AL354893.1-201ENST00000433735 348 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 GAPDHP59-201ENST00000435908 267 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 POU5F1P5-201ENST00000445059 658 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AC113367.2-201ENST00000505749 160 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AC112484.3-201ENST00000505910 329 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 ZNF519P4-201ENST00000514008 125 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 RNA5SP441-201ENST00000516809 88 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 KCTD9P4-201ENST00000526766 1166 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AL078601.3-201ENST00000573303 535 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 RPSAP75-201ENST00000605848 301 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 SNORA74.4-201ENST00000607595 199 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AL135999.3-201ENST00000610501 812 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AC024255.1-201ENST00000614376 102 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 MIR7159-201ENST00000620587 66 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 RNA5SP346-201ENST00000363541 121 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 RNA5SP478-201ENST00000364657 115 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 RNA5SP279-201ENST00000365513 117 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 YWHAZP6-201ENST00000399764 738 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 UBE2V1P14-201ENST00000415815 558 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 RPS7P14-201ENST00000426405 583 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 TIMM8BP2-201ENST00000445940 251 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 AC092967.1-201ENST00000449016 481 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 AL133351.3-201ENST00000454998 193 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 OR7E22P-201ENST00000478335 1035 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 RN7SL362P-201ENST00000494228 267 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 RN7SL104P-201ENST00000498686 293 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 KHDC1P1-201ENST00000511053 508 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 HMGN1P17-201ENST00000513734 295 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 IGHV1-14-201ENST00000523391 241 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 AC004232.2-201ENST00000574245 821 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 AC067852.5-201ENST00000589299 310 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 GUCY1B2-204ENST00000531898 1979 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms