Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC50Q8IVM0 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC50Q8IVM0 AC103855.4-201ENST00000533158 265 ntBASIC6.73□□□□□ -1.33
CCDC50Q8IVM0 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC50Q8IVM0 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC50Q8IVM0 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC50Q8IVM0 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC50Q8IVM0 RPS4XP21-201ENST00000603814 750 ntBASIC6.73□□□□□ -1.33
CCDC50Q8IVM0 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC50Q8IVM0 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CCDC50Q8IVM0 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC50Q8IVM0 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
CCDC50Q8IVM0 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC50Q8IVM0 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC50Q8IVM0 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
CCDC50Q8IVM0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 PPIAP24-201ENST00000328558 471 ntBASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 TMA16P2-201ENST00000413187 601 ntBASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 AC022080.2-201ENST00000452932 533 ntBASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 RN7SKP196-201ENST00000516267 345 ntBASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 IGKV1D-22-201ENST00000518953 324 ntBASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 AC089984.3-201ENST00000552838 363 ntBASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 PPIAP14-201ENST00000577627 496 ntBASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 MIR378H-201ENST00000579966 83 ntBASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 AL137000.1-201ENST00000610528 1244 ntBASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCDC50Q8IVM0 LINC01616-201ENST00000561816 2280 ntBASIC6.71□□□□□ -1.33
CCDC50Q8IVM0 BIN2P1-201ENST00000504996 1530 ntBASIC6.71□□□□□ -1.33
CCDC50Q8IVM0 AC005725.1-201ENST00000577346 2607 ntBASIC6.71□□□□□ -1.33
CCDC50Q8IVM0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC50Q8IVM0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC50Q8IVM0 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AL121839.2-201ENST00000565058 6943 ntBASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 RNA5SP140-201ENST00000364524 92 ntBASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 RNA5SP478-201ENST00000364657 115 ntBASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 UBE2V1P14-201ENST00000415815 558 ntBASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 SLAMF6P1-201ENST00000451067 602 ntBASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AC073648.3-201ENST00000504939 925 ntBASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 SCARNA11.1-201ENST00000516918 132 ntBASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AP002004.1-206ENST00000532441 876 ntBASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AL121579.2-201ENST00000555466 590 ntBASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 RN7SL657P-201ENST00000582431 293 ntBASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AC019257.2-201ENST00000605539 497 ntBASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 RAB28P4-201ENST00000622233 665 ntBASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC50Q8IVM0 AL049634.1-201ENST00000453770 1720 ntBASIC6.7□□□□□ -1.34
CCDC50Q8IVM0 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC50Q8IVM0 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC50Q8IVM0 AC009220.2-201ENST00000489759 1751 ntBASIC6.7□□□□□ -1.34
CCDC50Q8IVM0 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
CCDC50Q8IVM0 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms