Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 SF3A3P1-201ENST00000446317 1477 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 RNU1-16P-201ENST00000365477 164 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 HMGB3P1-201ENST00000393368 573 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 SETP22-201ENST00000412243 957 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 NPM1P11-201ENST00000417106 855 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC109638.1-201ENST00000417406 326 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 VN1R42P-201ENST00000424651 344 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 RNF19BPX-201ENST00000426224 625 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 EEF1A1P27-201ENST00000429983 1135 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC005040.1-201ENST00000437783 482 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 WASF1P1-201ENST00000447560 1131 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 MRPS21P1-201ENST00000453850 223 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 RN7SL282P-201ENST00000479676 297 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC127024.1-201ENST00000490847 418 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC079382.1-201ENST00000493346 557 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 RN7SL569P-201ENST00000494652 288 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 PRDX4P1-201ENST00000507189 574 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC106774.2-201ENST00000510266 406 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC114940.1-201ENST00000512162 1265 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC025465.4-201ENST00000513422 638 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 RNU6-1028P-201ENST00000517164 93 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AP003385.2-201ENST00000524910 973 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 GLYCAM1-201ENST00000546596 285 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 NPM1P47-201ENST00000560843 856 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC138749.2-201ENST00000566048 167 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 MTND4LP24-201ENST00000572277 291 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 MIR4786-201ENST00000583954 80 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 VN1R82P-201ENST00000601481 356 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC008945.2-201ENST00000606056 604 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC007684.1-201ENST00000609671 477 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC009120.7-201ENST00000623452 780 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 FGL2-202ENST00000637771 989 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 FP325313.1-201ENST00000638228 703 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 OR8A1-204ENST00000642111 1145 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC069222.1-201ENST00000608028 3360 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 GTF2IP1-202ENST00000614592 2047 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 HYDIN2-203ENST00000614586 13885 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.82□□□□□ -1.32
ATG4DQ86TL0 AC087045.3-201ENST00000623046 2468 ntBASIC6.82□□□□□ -1.32
ATG4DQ86TL0 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 AF131215.2-201ENST00000531549 1710 ntBASIC6.81□□□□□ -1.32
ATG4DQ86TL0 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 FGG-204ENST00000405164 1539 ntTSL 5 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC6.81□□□□□ -1.32
ATG4DQ86TL0 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms