Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC008055.1-201ENST00000547032 609 ntBASIC6.65□□□□□ -1.34
RFWD3Q6PCD5 AC023310.2-201ENST00000553844 547 ntBASIC6.65□□□□□ -1.34
RFWD3Q6PCD5 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.65□□□□□ -1.34
RFWD3Q6PCD5 TPRX1P1-201ENST00000557620 319 ntBASIC6.65□□□□□ -1.34
RFWD3Q6PCD5 OR1E3-201ENST00000575608 948 ntBASIC6.65□□□□□ -1.34
RFWD3Q6PCD5 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.65□□□□□ -1.34
RFWD3Q6PCD5 AL589863.1-201ENST00000595383 631 ntBASIC6.65□□□□□ -1.34
RFWD3Q6PCD5 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.65□□□□□ -1.34
RFWD3Q6PCD5 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.65□□□□□ -1.34
RFWD3Q6PCD5 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.65□□□□□ -1.34
RFWD3Q6PCD5 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RFWD3Q6PCD5 AL121936.2-201ENST00000641935 662 ntBASIC6.65□□□□□ -1.34
RFWD3Q6PCD5 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
RFWD3Q6PCD5 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.65□□□□□ -1.35
RFWD3Q6PCD5 AC105749.1-201ENST00000631338 2008 ntBASIC6.65□□□□□ -1.35
RFWD3Q6PCD5 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
RFWD3Q6PCD5 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RFWD3Q6PCD5 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
RFWD3Q6PCD5 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.35
RFWD3Q6PCD5 AL353743.3-201ENST00000442109 1468 ntBASIC6.65□□□□□ -1.35
RFWD3Q6PCD5 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
RFWD3Q6PCD5 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.65□□□□□ -1.35
RFWD3Q6PCD5 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
RFWD3Q6PCD5 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.65□□□□□ -1.35
RFWD3Q6PCD5 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
RFWD3Q6PCD5 AC007114.2-201ENST00000576014 4281 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 AC006511.3-201ENST00000624929 1783 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 AC068769.1-201ENST00000474767 2426 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 STAG3L4-201ENST00000352103 530 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 RN7SKP86-201ENST00000410454 332 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 AC017035.1-201ENST00000411999 1115 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 DHFRP2-201ENST00000414224 547 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 MTND2P12-201ENST00000417560 1252 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 RPL21P50-201ENST00000417698 477 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 OR2L9P-201ENST00000444456 913 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 RN7SL552P-201ENST00000462094 276 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 NPM1P27-201ENST00000502784 830 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 RNA5SP473-201ENST00000516402 125 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 RNA5SP441-201ENST00000516809 88 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 AC009729.1-201ENST00000548873 1133 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 MIR6721-201ENST00000617181 87 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 AL683826.1-201ENST00000624104 627 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 AC111152.1-202ENST00000635848 339 ntBASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFWD3Q6PCD5 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 SNORA70H-201ENST00000383910 135 ntBASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 SNORA70J-201ENST00000384182 135 ntBASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 ZNF402P-201ENST00000404435 3100 ntBASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 MIR1275-201ENST00000408770 80 ntBASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 RNU2-18P-201ENST00000411224 162 ntBASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 RPS21P8-201ENST00000413365 247 ntBASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.63□□□□□ -1.35
RFWD3Q6PCD5 GAPDHP59-201ENST00000435908 267 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms