Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 AC097721.1-201ENST00000427150 1253 ntBASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 AC104164.1-201ENST00000460282 590 ntBASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 AC073594.1-201ENST00000462065 364 ntBASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 AC138866.2-201ENST00000508650 584 ntBASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 uc_338.26-201ENST00000612659 160 ntBASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 AL445649.1-201ENST00000615941 691 ntBASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 NCOA4P3-201ENST00000513203 1877 ntBASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 UGT2B27P-201ENST00000505092 1620 ntBASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 AC011369.2-201ENST00000624423 1567 ntBASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 ING3-204ENST00000431467 1447 ntTSL 2 BASIC9.23□□□□□ -0.93
CDC42BPAQ5VT25 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 HMGB1P20-201ENST00000402555 677 ntBASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 AL596448.1-201ENST00000415024 392 ntBASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 AC114728.1-201ENST00000488289 483 ntBASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 GNG2-208ENST00000554875 430 ntTSL 5 BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 AC011815.2-201ENST00000618230 2021 ntBASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 AL121776.1-201ENST00000429337 372 ntBASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 PCNAP4-201ENST00000532690 730 ntBASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 IMMP1LP3-201ENST00000604197 224 ntBASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 AL021368.3-201ENST00000607119 578 ntBASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42BPAQ5VT25 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42BPAQ5VT25 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42BPAQ5VT25 RMST-210ENST00000640149 2844 ntTSL 5 BASIC9.21□□□□□ -0.93
CDC42BPAQ5VT25 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
CDC42BPAQ5VT25 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42BPAQ5VT25 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42BPAQ5VT25 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CDC42BPAQ5VT25 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC9.21□□□□□ -0.94
CDC42BPAQ5VT25 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC9.21□□□□□ -0.94
CDC42BPAQ5VT25 AC016739.1-201ENST00000405359 345 ntBASIC9.21□□□□□ -0.94
CDC42BPAQ5VT25 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC9.21□□□□□ -0.94
CDC42BPAQ5VT25 RPL23AP60-201ENST00000450011 454 ntBASIC9.21□□□□□ -0.94
CDC42BPAQ5VT25 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC9.21□□□□□ -0.94
CDC42BPAQ5VT25 AC006499.3-201ENST00000506077 748 ntBASIC9.21□□□□□ -0.94
CDC42BPAQ5VT25 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CDC42BPAQ5VT25 AC022726.2-201ENST00000634673 547 ntBASIC9.21□□□□□ -0.94
CDC42BPAQ5VT25 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
CDC42BPAQ5VT25 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC9.21□□□□□ -0.94
CDC42BPAQ5VT25 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
CDC42BPAQ5VT25 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
CDC42BPAQ5VT25 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CDC42BPAQ5VT25 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CDC42BPAQ5VT25 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CDC42BPAQ5VT25 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC9.2□□□□□ -0.94
CDC42BPAQ5VT25 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
CDC42BPAQ5VT25 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42BPAQ5VT25 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC9.2□□□□□ -0.94
CDC42BPAQ5VT25 AP002370.1-201ENST00000528055 1602 ntBASIC9.2□□□□□ -0.94
CDC42BPAQ5VT25 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42BPAQ5VT25 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
CDC42BPAQ5VT25 AL445928.1-201ENST00000435545 222 ntBASIC9.2□□□□□ -0.94
CDC42BPAQ5VT25 FMO7P-201ENST00000436045 768 ntBASIC9.2□□□□□ -0.94
CDC42BPAQ5VT25 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC9.2□□□□□ -0.94
CDC42BPAQ5VT25 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC9.2□□□□□ -0.94
CDC42BPAQ5VT25 CYCSP22-201ENST00000517555 339 ntBASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms