Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC063943.2-201ENST00000495697 534 ntBASIC7.31□□□□□ -1.24
CCNA1P78396 AC095057.1-201ENST00000507583 168 ntBASIC7.31□□□□□ -1.24
CCNA1P78396 AC106872.4-201ENST00000510050 523 ntBASIC7.31□□□□□ -1.24
CCNA1P78396 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCNA1P78396 AC130365.2-201ENST00000525882 1201 ntBASIC7.31□□□□□ -1.24
CCNA1P78396 AP003396.4-201ENST00000527574 265 ntBASIC7.31□□□□□ -1.24
CCNA1P78396 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCNA1P78396 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.31□□□□□ -1.24
CCNA1P78396 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.31□□□□□ -1.24
CCNA1P78396 AC090616.1-201ENST00000583895 447 ntBASIC7.31□□□□□ -1.24
CCNA1P78396 AC005332.4-201ENST00000592752 579 ntBASIC7.31□□□□□ -1.24
CCNA1P78396 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.31□□□□□ -1.24
CCNA1P78396 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.31□□□□□ -1.24
CCNA1P78396 AP001823.1-201ENST00000604056 1003 ntBASIC7.31□□□□□ -1.24
CCNA1P78396 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.31□□□□□ -1.24
CCNA1P78396 MRPL57P1-201ENST00000621486 265 ntBASIC7.31□□□□□ -1.24
CCNA1P78396 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.31□□□□□ -1.24
CCNA1P78396 AC129915.3-201ENST00000634128 948 ntBASIC7.31□□□□□ -1.24
CCNA1P78396 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.31□□□□□ -1.24
CCNA1P78396 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.31□□□□□ -1.24
CCNA1P78396 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.31□□□□□ -1.24
CCNA1P78396 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCNA1P78396 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCNA1P78396 AL354854.1-201ENST00000455940 1363 ntBASIC7.31□□□□□ -1.24
CCNA1P78396 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCNA1P78396 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.31□□□□□ -1.24
CCNA1P78396 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CCNA1P78396 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CCNA1P78396 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCNA1P78396 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCNA1P78396 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCNA1P78396 MAPK10-383ENST00000642032 3390 ntBASIC7.3□□□□□ -1.24
CCNA1P78396 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.3□□□□□ -1.24
CCNA1P78396 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
CCNA1P78396 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCNA1P78396 RNA5SP346-201ENST00000363541 121 ntBASIC7.3□□□□□ -1.24
CCNA1P78396 AL031985.1-201ENST00000392713 418 ntBASIC7.3□□□□□ -1.24
CCNA1P78396 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCNA1P78396 MTATP6P1-201ENST00000514057 681 ntBASIC7.3□□□□□ -1.24
CCNA1P78396 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCNA1P78396 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.3□□□□□ -1.24
CCNA1P78396 AC007956.1-201ENST00000555623 542 ntBASIC7.3□□□□□ -1.24
CCNA1P78396 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.3□□□□□ -1.24
CCNA1P78396 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.3□□□□□ -1.24
CCNA1P78396 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC7.3□□□□□ -1.24
CCNA1P78396 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.3□□□□□ -1.24
CCNA1P78396 AC100767.2-201ENST00000604840 693 ntBASIC7.3□□□□□ -1.24
CCNA1P78396 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCNA1P78396 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.3□□□□□ -1.24
CCNA1P78396 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCNA1P78396 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCNA1P78396 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.3□□□□□ -1.24
CCNA1P78396 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCNA1P78396 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CCNA1P78396 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.3□□□□□ -1.24
CCNA1P78396 BX322650.1-201ENST00000332359 2143 ntBASIC7.3□□□□□ -1.24
CCNA1P78396 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCNA1P78396 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCNA1P78396 AL359976.1-201ENST00000418655 3528 ntBASIC7.3□□□□□ -1.24
CCNA1P78396 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCNA1P78396 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.29□□□□□ -1.24
CCNA1P78396 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.29□□□□□ -1.24
CCNA1P78396 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCNA1P78396 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCNA1P78396 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCNA1P78396 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCNA1P78396 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCNA1P78396 OR7E25P-201ENST00000344844 931 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 RN7SKP69-201ENST00000365390 305 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 RN7SKP81-201ENST00000365603 331 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 MIR130B-202ENST00000385018 82 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 SNORA17A-201ENST00000391185 133 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 AL512422.1-201ENST00000407033 553 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.29□□□□□ -1.24
CCNA1P78396 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.29□□□□□ -1.24
CCNA1P78396 AC073109.1-201ENST00000445066 978 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.29□□□□□ -1.24
CCNA1P78396 NXT1P1-201ENST00000458481 316 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 AC021074.2-201ENST00000468434 172 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 RN7SL101P-201ENST00000496350 279 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 MTND6P8-201ENST00000503471 522 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 SCARNA21.2-201ENST00000516600 166 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 RNA5SP271-201ENST00000516700 88 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.29□□□□□ -1.24
CCNA1P78396 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.29□□□□□ -1.24
CCNA1P78396 AC007448.1-201ENST00000582714 234 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCNA1P78396 AC245014.3-201ENST00000618589 347 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 SNORA17.5-201ENST00000630429 132 ntBASIC7.29□□□□□ -1.24
CCNA1P78396 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.29□□□□□ -1.24
CCNA1P78396 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CCNA1P78396 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
CCNA1P78396 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCNA1P78396 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCNA1P78396 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.29□□□□□ -1.24
CCNA1P78396 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCNA1P78396 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CCNA1P78396 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms