Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPL39P62891 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.35□□□□□ -1.71
RPL39P62891 SNORA11D-201ENST00000408548 128 ntBASIC4.35□□□□□ -1.71
RPL39P62891 SNORA11E-201ENST00000408778 128 ntBASIC4.35□□□□□ -1.71
RPL39P62891 AL354868.1-201ENST00000417077 482 ntBASIC4.35□□□□□ -1.71
RPL39P62891 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.35□□□□□ -1.71
RPL39P62891 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC4.35□□□□□ -1.71
RPL39P62891 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC4.35□□□□□ -1.71
RPL39P62891 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC4.35□□□□□ -1.71
RPL39P62891 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC4.35□□□□□ -1.71
RPL39P62891 AC093719.1-201ENST00000480427 441 ntBASIC4.35□□□□□ -1.71
RPL39P62891 RN7SL714P-201ENST00000487050 298 ntBASIC4.35□□□□□ -1.71
RPL39P62891 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC4.35□□□□□ -1.71
RPL39P62891 AC093878.1-201ENST00000515630 432 ntBASIC4.35□□□□□ -1.71
RPL39P62891 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC4.35□□□□□ -1.71
RPL39P62891 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC4.35□□□□□ -1.71
RPL39P62891 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC4.35□□□□□ -1.71
RPL39P62891 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC4.35□□□□□ -1.71
RPL39P62891 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RPL39P62891 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC4.35□□□□□ -1.71
RPL39P62891 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC4.35□□□□□ -1.71
RPL39P62891 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC4.35□□□□□ -1.71
RPL39P62891 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC4.35□□□□□ -1.71
RPL39P62891 TPRX1P1-201ENST00000557620 319 ntBASIC4.35□□□□□ -1.71
RPL39P62891 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC4.35□□□□□ -1.71
RPL39P62891 MIR4685-201ENST00000578185 69 ntBASIC4.35□□□□□ -1.71
RPL39P62891 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC4.35□□□□□ -1.71
RPL39P62891 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC4.35□□□□□ -1.71
RPL39P62891 AL035417.2-201ENST00000603887 796 ntBASIC4.35□□□□□ -1.71
RPL39P62891 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC4.35□□□□□ -1.71
RPL39P62891 MIR7854-201ENST00000620068 65 ntBASIC4.35□□□□□ -1.71
RPL39P62891 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPL39P62891 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC4.35□□□□□ -1.71
RPL39P62891 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC4.35□□□□□ -1.71
RPL39P62891 TUBBP10-201ENST00000427668 1301 ntBASIC4.35□□□□□ -1.71
RPL39P62891 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPL39P62891 AC100810.3-201ENST00000633189 2240 ntBASIC4.35□□□□□ -1.71
RPL39P62891 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RPL39P62891 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPL39P62891 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.35□□□□□ -1.71
RPL39P62891 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RPL39P62891 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.35□□□□□ -1.71
RPL39P62891 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC4.35□□□□□ -1.71
RPL39P62891 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.35□□□□□ -1.71
RPL39P62891 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPL39P62891 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPL39P62891 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.35□□□□□ -1.71
RPL39P62891 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPL39P62891 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RPL39P62891 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RPL39P62891 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.35□□□□□ -1.71
RPL39P62891 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.35□□□□□ -1.71
RPL39P62891 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC4.35□□□□□ -1.71
RPL39P62891 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPL39P62891 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPL39P62891 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
RPL39P62891 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
RPL39P62891 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RPL39P62891 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.34□□□□□ -1.71
RPL39P62891 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.34□□□□□ -1.71
RPL39P62891 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.34□□□□□ -1.71
RPL39P62891 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC4.34□□□□□ -1.71
RPL39P62891 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPL39P62891 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPL39P62891 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPL39P62891 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.34□□□□□ -1.71
RPL39P62891 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPL39P62891 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RPL39P62891 MRPS6P2-201ENST00000381143 370 ntBASIC4.34□□□□□ -1.71
RPL39P62891 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RPL39P62891 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPL39P62891 RN7SKP30-201ENST00000411373 334 ntBASIC4.34□□□□□ -1.71
RPL39P62891 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.34□□□□□ -1.71
RPL39P62891 AL139184.1-202ENST00000422303 222 ntBASIC4.34□□□□□ -1.71
RPL39P62891 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC4.34□□□□□ -1.71
RPL39P62891 AC092421.1-201ENST00000448148 418 ntBASIC4.34□□□□□ -1.71
RPL39P62891 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC4.34□□□□□ -1.71
RPL39P62891 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RPL39P62891 AL451063.1-201ENST00000450164 1133 ntBASIC4.34□□□□□ -1.71
RPL39P62891 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RPL39P62891 RAB28P2-201ENST00000454299 641 ntBASIC4.34□□□□□ -1.71
RPL39P62891 UCK2-205ENST00000469256 753 ntTSL 3 BASIC4.34□□□□□ -1.71
RPL39P62891 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.34□□□□□ -1.71
RPL39P62891 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC4.34□□□□□ -1.71
RPL39P62891 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC4.34□□□□□ -1.71
RPL39P62891 ST13P12-201ENST00000508958 1094 ntBASIC4.34□□□□□ -1.71
RPL39P62891 AC010343.2-201ENST00000510162 224 ntBASIC4.34□□□□□ -1.71
RPL39P62891 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.34□□□□□ -1.71
RPL39P62891 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RPL39P62891 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.34□□□□□ -1.71
RPL39P62891 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.34□□□□□ -1.71
RPL39P62891 AC092865.1-201ENST00000544395 1023 ntBASIC4.34□□□□□ -1.71
RPL39P62891 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC4.34□□□□□ -1.71
RPL39P62891 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.34□□□□□ -1.71
RPL39P62891 CIPC-206ENST00000555611 599 ntTSL 4 BASIC4.34□□□□□ -1.71
RPL39P62891 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC4.34□□□□□ -1.71
RPL39P62891 AC092718.4-201ENST00000566639 716 ntBASIC4.34□□□□□ -1.71
RPL39P62891 AC073046.2-201ENST00000604756 527 ntBASIC4.34□□□□□ -1.71
RPL39P62891 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC4.34□□□□□ -1.71
RPL39P62891 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms