Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.28□□□□□ -1.24
HMGCS2P54868 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.28□□□□□ -1.24
HMGCS2P54868 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 AL513218.1-201ENST00000606527 391 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 AC109309.2-201ENST00000612597 332 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.28□□□□□ -1.24
HMGCS2P54868 AC127024.6-201ENST00000621598 424 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.28□□□□□ -1.24
HMGCS2P54868 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.28□□□□□ -1.24
HMGCS2P54868 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HMGCS2P54868 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
HMGCS2P54868 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
HMGCS2P54868 FO393409.1-201ENST00000399325 1372 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 AC010624.4-201ENST00000597606 1351 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 AC011455.2-201ENST00000599320 3336 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HMGCS2P54868 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
HMGCS2P54868 NBPF8-201ENST00000583271 5330 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HMGCS2P54868 AC009166.2-201ENST00000624410 2833 ntBASIC7.28□□□□□ -1.24
HMGCS2P54868 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.24
HMGCS2P54868 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
HMGCS2P54868 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
HMGCS2P54868 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
HMGCS2P54868 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
HMGCS2P54868 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HMGCS2P54868 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HMGCS2P54868 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.27□□□□□ -1.25
HMGCS2P54868 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HMGCS2P54868 AC079355.1-201ENST00000421770 223 ntBASIC7.27□□□□□ -1.25
HMGCS2P54868 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.27□□□□□ -1.25
HMGCS2P54868 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.27□□□□□ -1.25
HMGCS2P54868 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.27□□□□□ -1.25
HMGCS2P54868 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.27□□□□□ -1.25
HMGCS2P54868 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.27□□□□□ -1.25
HMGCS2P54868 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.27□□□□□ -1.25
HMGCS2P54868 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.27□□□□□ -1.25
HMGCS2P54868 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
HMGCS2P54868 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.27□□□□□ -1.25
HMGCS2P54868 TSHZ2-205ENST00000626626 670 ntBASIC7.27□□□□□ -1.25
HMGCS2P54868 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.27□□□□□ -1.25
HMGCS2P54868 AL132640.3-201ENST00000630473 177 ntBASIC7.27□□□□□ -1.25
HMGCS2P54868 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC7.27□□□□□ -1.25
HMGCS2P54868 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HMGCS2P54868 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HMGCS2P54868 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HMGCS2P54868 SPATA31C1-201ENST00000420021 3895 ntBASIC7.27□□□□□ -1.25
HMGCS2P54868 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
HMGCS2P54868 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HMGCS2P54868 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.27□□□□□ -1.25
HMGCS2P54868 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
HMGCS2P54868 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HMGCS2P54868 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.27□□□□□ -1.25
HMGCS2P54868 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HMGCS2P54868 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.27□□□□□ -1.25
HMGCS2P54868 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
HMGCS2P54868 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HMGCS2P54868 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HMGCS2P54868 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.26□□□□□ -1.25
HMGCS2P54868 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HMGCS2P54868 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HMGCS2P54868 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
HMGCS2P54868 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.26□□□□□ -1.25
HMGCS2P54868 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.26□□□□□ -1.25
HMGCS2P54868 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HMGCS2P54868 RNA5SP156-201ENST00000410250 110 ntBASIC7.26□□□□□ -1.25
HMGCS2P54868 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.26□□□□□ -1.25
HMGCS2P54868 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC7.26□□□□□ -1.25
HMGCS2P54868 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.26□□□□□ -1.25
HMGCS2P54868 AL161636.2-201ENST00000445179 927 ntBASIC7.26□□□□□ -1.25
HMGCS2P54868 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC7.26□□□□□ -1.25
HMGCS2P54868 MORF4-201ENST00000447135 971 ntBASIC7.26□□□□□ -1.25
HMGCS2P54868 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC7.26□□□□□ -1.25
HMGCS2P54868 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.26□□□□□ -1.25
HMGCS2P54868 AC010343.2-201ENST00000510162 224 ntBASIC7.26□□□□□ -1.25
HMGCS2P54868 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.26□□□□□ -1.25
HMGCS2P54868 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.26□□□□□ -1.25
HMGCS2P54868 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC7.26□□□□□ -1.25
HMGCS2P54868 AC021269.1-201ENST00000526860 705 ntBASIC7.26□□□□□ -1.25
HMGCS2P54868 AC027544.3-201ENST00000535082 757 ntBASIC7.26□□□□□ -1.25
HMGCS2P54868 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.26□□□□□ -1.25
HMGCS2P54868 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.26□□□□□ -1.25
HMGCS2P54868 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.26□□□□□ -1.25
HMGCS2P54868 AC092121.1-201ENST00000569452 202 ntBASIC7.26□□□□□ -1.25
HMGCS2P54868 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.26□□□□□ -1.25
HMGCS2P54868 OR7A1P-201ENST00000601206 970 ntBASIC7.26□□□□□ -1.25
HMGCS2P54868 SNORD91A-202ENST00000609620 191 ntBASIC7.26□□□□□ -1.25
HMGCS2P54868 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.26□□□□□ -1.25
HMGCS2P54868 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HMGCS2P54868 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
HMGCS2P54868 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HMGCS2P54868 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HMGCS2P54868 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HMGCS2P54868 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.26□□□□□ -1.25
HMGCS2P54868 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.26□□□□□ -1.25
HMGCS2P54868 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HMGCS2P54868 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
HMGCS2P54868 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HMGCS2P54868 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
HMGCS2P54868 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms