Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AL132640.3-201ENST00000630473 177 ntBASIC6.26□□□□□ -1.41
SHMT2P34897 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.26□□□□□ -1.41
SHMT2P34897 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHMT2P34897 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.26□□□□□ -1.41
SHMT2P34897 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
SHMT2P34897 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHMT2P34897 AC011455.2-201ENST00000599320 3336 ntBASIC6.26□□□□□ -1.41
SHMT2P34897 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHMT2P34897 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.26□□□□□ -1.41
SHMT2P34897 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
SHMT2P34897 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
SHMT2P34897 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHMT2P34897 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHMT2P34897 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
SHMT2P34897 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SHMT2P34897 DOCK11P1-201ENST00000553480 5932 ntBASIC6.26□□□□□ -1.41
SHMT2P34897 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHMT2P34897 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHMT2P34897 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHMT2P34897 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHMT2P34897 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.25□□□□□ -1.41
SHMT2P34897 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHMT2P34897 FAM32BP-201ENST00000344033 333 ntBASIC6.25□□□□□ -1.41
SHMT2P34897 RN7SKP250-201ENST00000363924 321 ntBASIC6.25□□□□□ -1.41
SHMT2P34897 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHMT2P34897 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SHMT2P34897 YWHAZP4-201ENST00000392459 708 ntBASIC6.25□□□□□ -1.41
SHMT2P34897 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHMT2P34897 PSMA6P1-201ENST00000400275 741 ntBASIC6.25□□□□□ -1.41
SHMT2P34897 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.25□□□□□ -1.41
SHMT2P34897 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.25□□□□□ -1.41
SHMT2P34897 RPL7AP51-201ENST00000422016 760 ntBASIC6.25□□□□□ -1.41
SHMT2P34897 AC007568.1-201ENST00000422912 471 ntBASIC6.25□□□□□ -1.41
SHMT2P34897 CLNS1AP1-201ENST00000435954 682 ntBASIC6.25□□□□□ -1.41
SHMT2P34897 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.25□□□□□ -1.41
SHMT2P34897 AC007383.1-201ENST00000445875 636 ntBASIC6.25□□□□□ -1.41
SHMT2P34897 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHMT2P34897 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.25□□□□□ -1.41
SHMT2P34897 AC093816.1-201ENST00000515076 913 ntBASIC6.25□□□□□ -1.41
SHMT2P34897 SNORA74.1-201ENST00000516320 180 ntBASIC6.25□□□□□ -1.41
SHMT2P34897 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.25□□□□□ -1.41
SHMT2P34897 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.25□□□□□ -1.41
SHMT2P34897 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.25□□□□□ -1.41
SHMT2P34897 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.25□□□□□ -1.41
SHMT2P34897 BMS1P16-201ENST00000556075 1147 ntBASIC6.25□□□□□ -1.41
SHMT2P34897 AC011500.1-201ENST00000601963 469 ntBASIC6.25□□□□□ -1.41
SHMT2P34897 SNORA74.4-201ENST00000607595 199 ntBASIC6.25□□□□□ -1.41
SHMT2P34897 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.25□□□□□ -1.41
SHMT2P34897 AC012254.5-201ENST00000623573 478 ntBASIC6.25□□□□□ -1.41
SHMT2P34897 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHMT2P34897 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SHMT2P34897 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHMT2P34897 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SHMT2P34897 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHMT2P34897 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHMT2P34897 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.25□□□□□ -1.41
SHMT2P34897 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.25□□□□□ -1.41
SHMT2P34897 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SHMT2P34897 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHMT2P34897 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
SHMT2P34897 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.25□□□□□ -1.41
SHMT2P34897 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHMT2P34897 LINC01613-201ENST00000561476 2780 ntBASIC6.24□□□□□ -1.41
SHMT2P34897 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SHMT2P34897 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.24□□□□□ -1.41
SHMT2P34897 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.24□□□□□ -1.41
SHMT2P34897 AC007114.2-201ENST00000576014 4281 ntBASIC6.24□□□□□ -1.41
SHMT2P34897 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHMT2P34897 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHMT2P34897 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.24□□□□□ -1.41
SHMT2P34897 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SHMT2P34897 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHMT2P34897 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHMT2P34897 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHMT2P34897 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SHMT2P34897 OR11H13P-201ENST00000359695 979 ntBASIC6.24□□□□□ -1.41
SHMT2P34897 SNORD16-201ENST00000362803 99 ntBASIC6.24□□□□□ -1.41
SHMT2P34897 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SHMT2P34897 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHMT2P34897 RN7SKP281-201ENST00000410472 352 ntBASIC6.24□□□□□ -1.41
SHMT2P34897 RPL21P50-201ENST00000417698 477 ntBASIC6.24□□□□□ -1.41
SHMT2P34897 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHMT2P34897 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.24□□□□□ -1.41
SHMT2P34897 MED28P4-201ENST00000433137 572 ntBASIC6.24□□□□□ -1.41
SHMT2P34897 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.24□□□□□ -1.41
SHMT2P34897 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SHMT2P34897 AC005165.2-201ENST00000466070 380 ntBASIC6.24□□□□□ -1.41
SHMT2P34897 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.24□□□□□ -1.41
SHMT2P34897 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.24□□□□□ -1.41
SHMT2P34897 AC092824.1-201ENST00000483524 576 ntBASIC6.24□□□□□ -1.41
SHMT2P34897 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHMT2P34897 RN7SL568P-201ENST00000493069 298 ntBASIC6.24□□□□□ -1.41
SHMT2P34897 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.24□□□□□ -1.41
SHMT2P34897 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.24□□□□□ -1.41
SHMT2P34897 RNA5SP418-201ENST00000515951 117 ntBASIC6.24□□□□□ -1.41
SHMT2P34897 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.24□□□□□ -1.41
SHMT2P34897 AC116917.1-201ENST00000520558 305 ntBASIC6.24□□□□□ -1.41
SHMT2P34897 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.24□□□□□ -1.41
SHMT2P34897 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.24□□□□□ -1.41
SHMT2P34897 RN7SL230P-201ENST00000580835 303 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms