Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC7.2□□□□□ -1.26
CIITAP33076 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.2□□□□□ -1.26
CIITAP33076 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.2□□□□□ -1.26
CIITAP33076 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC7.2□□□□□ -1.26
CIITAP33076 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC7.2□□□□□ -1.26
CIITAP33076 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.2□□□□□ -1.26
CIITAP33076 AP002345.2-201ENST00000609961 904 ntBASIC7.2□□□□□ -1.26
CIITAP33076 MIR6780B-201ENST00000610307 79 ntBASIC7.2□□□□□ -1.26
CIITAP33076 AL445649.1-201ENST00000615941 691 ntBASIC7.2□□□□□ -1.26
CIITAP33076 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CIITAP33076 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CIITAP33076 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.2□□□□□ -1.26
CIITAP33076 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
CIITAP33076 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
CIITAP33076 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CIITAP33076 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.2□□□□□ -1.26
CIITAP33076 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.2□□□□□ -1.26
CIITAP33076 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CIITAP33076 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CIITAP33076 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.19□□□□□ -1.26
CIITAP33076 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CIITAP33076 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CIITAP33076 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CIITAP33076 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
CIITAP33076 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CIITAP33076 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CIITAP33076 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CIITAP33076 AC099654.3-201ENST00000447087 1546 ntBASIC7.19□□□□□ -1.26
CIITAP33076 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
CIITAP33076 AC099535.1-201ENST00000408928 371 ntBASIC7.19□□□□□ -1.26
CIITAP33076 AL035422.1-201ENST00000414193 397 ntBASIC7.19□□□□□ -1.26
CIITAP33076 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CIITAP33076 RPS7P14-201ENST00000426405 583 ntBASIC7.19□□□□□ -1.26
CIITAP33076 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.19□□□□□ -1.26
CIITAP33076 GAPDHP59-201ENST00000435908 267 ntBASIC7.19□□□□□ -1.26
CIITAP33076 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.19□□□□□ -1.26
CIITAP33076 AL157385.1-201ENST00000446973 268 ntBASIC7.19□□□□□ -1.26
CIITAP33076 VN1R38P-201ENST00000450265 887 ntBASIC7.19□□□□□ -1.26
CIITAP33076 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.19□□□□□ -1.26
CIITAP33076 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.19□□□□□ -1.26
CIITAP33076 RN7SL326P-201ENST00000477493 296 ntBASIC7.19□□□□□ -1.26
CIITAP33076 OR7E22P-201ENST00000478335 1035 ntBASIC7.19□□□□□ -1.26
CIITAP33076 AC091874.2-201ENST00000505889 720 ntBASIC7.19□□□□□ -1.26
CIITAP33076 ZNF519P4-201ENST00000514008 125 ntBASIC7.19□□□□□ -1.26
CIITAP33076 RN7SKP98-201ENST00000517070 156 ntBASIC7.19□□□□□ -1.26
CIITAP33076 AC024405.1-201ENST00000532521 1042 ntBASIC7.19□□□□□ -1.26
CIITAP33076 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.19□□□□□ -1.26
CIITAP33076 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CIITAP33076 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC7.19□□□□□ -1.26
CIITAP33076 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC7.19□□□□□ -1.26
CIITAP33076 AL078601.3-201ENST00000573303 535 ntBASIC7.19□□□□□ -1.26
CIITAP33076 AC233702.7-202ENST00000582941 211 ntBASIC7.19□□□□□ -1.26
CIITAP33076 AL135999.3-201ENST00000610501 812 ntBASIC7.19□□□□□ -1.26
CIITAP33076 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.19□□□□□ -1.26
CIITAP33076 uc_338.31-201ENST00000615595 186 ntBASIC7.19□□□□□ -1.26
CIITAP33076 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.19□□□□□ -1.26
CIITAP33076 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CIITAP33076 AL359195.2-201ENST00000623657 4412 ntBASIC7.19□□□□□ -1.26
CIITAP33076 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CIITAP33076 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CIITAP33076 OR2AH1P-202ENST00000641232 2744 ntBASIC7.19□□□□□ -1.26
CIITAP33076 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.19□□□□□ -1.26
CIITAP33076 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CIITAP33076 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CIITAP33076 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CIITAP33076 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.19□□□□□ -1.26
CIITAP33076 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CIITAP33076 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CIITAP33076 AC005618.1-201ENST00000606901 3148 ntBASIC7.18□□□□□ -1.26
CIITAP33076 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CIITAP33076 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CIITAP33076 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CIITAP33076 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CIITAP33076 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CIITAP33076 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
CIITAP33076 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.18□□□□□ -1.26
CIITAP33076 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CIITAP33076 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.18□□□□□ -1.26
CIITAP33076 CXCR2P1-202ENST00000443392 1074 ntBASIC7.18□□□□□ -1.26
CIITAP33076 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.18□□□□□ -1.26
CIITAP33076 MARK2P8-201ENST00000476069 952 ntBASIC7.18□□□□□ -1.26
CIITAP33076 OR9A1P-202ENST00000484361 945 ntBASIC7.18□□□□□ -1.26
CIITAP33076 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.18□□□□□ -1.26
CIITAP33076 AC111000.5-201ENST00000506559 1178 ntBASIC7.18□□□□□ -1.26
CIITAP33076 AC018797.1-201ENST00000510791 255 ntBASIC7.18□□□□□ -1.26
CIITAP33076 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.18□□□□□ -1.26
CIITAP33076 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.18□□□□□ -1.26
CIITAP33076 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC7.18□□□□□ -1.26
CIITAP33076 AC023310.2-201ENST00000553844 547 ntBASIC7.18□□□□□ -1.26
CIITAP33076 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.18□□□□□ -1.26
CIITAP33076 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC7.18□□□□□ -1.26
CIITAP33076 MRPS21P9-201ENST00000571150 257 ntBASIC7.18□□□□□ -1.26
CIITAP33076 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.18□□□□□ -1.26
CIITAP33076 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CIITAP33076 AL591926.1-201ENST00000620542 217 ntBASIC7.18□□□□□ -1.26
CIITAP33076 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CIITAP33076 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.18□□□□□ -1.26
CIITAP33076 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CIITAP33076 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.18□□□□□ -1.26
CIITAP33076 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms