Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RPS10P21-201ENST00000430654 475 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 BX119917.1-201ENST00000432517 502 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 AC242426.1-201ENST00000435270 960 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.72□□□□□ -1.17
CNGA1P29973 HMGN1P2-201ENST00000445197 310 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 PFN1P11-201ENST00000445829 389 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 AC131233.1-201ENST00000479200 955 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC7.72□□□□□ -1.17
CNGA1P29973 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CNGA1P29973 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CNGA1P29973 AC112225.1-201ENST00000508230 297 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 AC090568.1-201ENST00000509499 856 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 AC006512.2-201ENST00000543250 486 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC7.72□□□□□ -1.17
CNGA1P29973 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.72□□□□□ -1.17
CNGA1P29973 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.72□□□□□ -1.17
CNGA1P29973 AL845552.1-201ENST00000556820 323 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.72□□□□□ -1.17
CNGA1P29973 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.72□□□□□ -1.17
CNGA1P29973 ULK4P1-202ENST00000565174 503 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 MRPS21P9-201ENST00000571150 257 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.72□□□□□ -1.17
CNGA1P29973 PRELID3BP3-201ENST00000584963 545 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 AC020914.7-201ENST00000594477 545 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 AL391001.1-201ENST00000602747 715 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 BX323046.1-201ENST00000610145 535 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 AC025262.3-201ENST00000623666 360 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CNGA1P29973 AC114546.4-201ENST00000624413 369 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CNGA1P29973 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CNGA1P29973 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CNGA1P29973 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.72□□□□□ -1.17
CNGA1P29973 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.72□□□□□ -1.17
CNGA1P29973 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CNGA1P29973 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CNGA1P29973 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.72□□□□□ -1.17
CNGA1P29973 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
CNGA1P29973 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC7.72□□□□□ -1.17
CNGA1P29973 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.72□□□□□ -1.17
CNGA1P29973 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.72□□□□□ -1.17
CNGA1P29973 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CNGA1P29973 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.72□□□□□ -1.17
CNGA1P29973 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CNGA1P29973 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.72□□□□□ -1.17
CNGA1P29973 MAPK10-270ENST00000641102 3538 ntBASIC7.72□□□□□ -1.17
CNGA1P29973 AC005261.6-201ENST00000623072 1387 ntBASIC7.71□□□□□ -1.17
CNGA1P29973 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
CNGA1P29973 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.71□□□□□ -1.17
CNGA1P29973 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.71□□□□□ -1.17
CNGA1P29973 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CNGA1P29973 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.71□□□□□ -1.17
CNGA1P29973 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNGA1P29973 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNGA1P29973 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNGA1P29973 RNA5SP512-201ENST00000364550 120 ntBASIC7.71□□□□□ -1.18
CNGA1P29973 PPIAP26-201ENST00000377951 522 ntBASIC7.71□□□□□ -1.18
CNGA1P29973 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CNGA1P29973 RN7SKP232-201ENST00000410170 290 ntBASIC7.71□□□□□ -1.18
CNGA1P29973 GAPDHP57-201ENST00000424400 585 ntBASIC7.71□□□□□ -1.18
CNGA1P29973 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC7.71□□□□□ -1.18
CNGA1P29973 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC7.71□□□□□ -1.18
CNGA1P29973 AC023141.6-201ENST00000429418 337 ntBASIC7.71□□□□□ -1.18
CNGA1P29973 UBE2V1P6-201ENST00000430840 422 ntBASIC7.71□□□□□ -1.18
CNGA1P29973 RPL23AP28-201ENST00000448062 470 ntBASIC7.71□□□□□ -1.18
CNGA1P29973 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.71□□□□□ -1.18
CNGA1P29973 OR2AF1P-201ENST00000454899 889 ntBASIC7.71□□□□□ -1.18
CNGA1P29973 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.71□□□□□ -1.18
CNGA1P29973 NDUFA5P5-201ENST00000468361 342 ntBASIC7.71□□□□□ -1.18
CNGA1P29973 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.71□□□□□ -1.18
CNGA1P29973 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CNGA1P29973 AC015908.1-201ENST00000478739 476 ntBASIC7.71□□□□□ -1.18
CNGA1P29973 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CNGA1P29973 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.71□□□□□ -1.18
CNGA1P29973 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
CNGA1P29973 AC140063.1-201ENST00000541343 259 ntBASIC7.71□□□□□ -1.18
CNGA1P29973 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC7.71□□□□□ -1.18
CNGA1P29973 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.71□□□□□ -1.18
CNGA1P29973 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.71□□□□□ -1.18
CNGA1P29973 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.71□□□□□ -1.18
CNGA1P29973 AC004908.1-201ENST00000606572 541 ntBASIC7.71□□□□□ -1.18
CNGA1P29973 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.71□□□□□ -1.18
CNGA1P29973 AL122023.1-201ENST00000622847 530 ntBASIC7.71□□□□□ -1.18
CNGA1P29973 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNGA1P29973 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNGA1P29973 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CNGA1P29973 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNGA1P29973 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CNGA1P29973 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNGA1P29973 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.71□□□□□ -1.18
CNGA1P29973 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNGA1P29973 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNGA1P29973 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.71□□□□□ -1.18
CNGA1P29973 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CNGA1P29973 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNGA1P29973 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.7□□□□□ -1.18
CNGA1P29973 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms