Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC8.11□□□□□ -1.11
LIG1P18858 AP006587.6-201ENST00000582128 1091 ntBASIC8.11□□□□□ -1.11
LIG1P18858 OR7A19P-201ENST00000608051 733 ntBASIC8.11□□□□□ -1.11
LIG1P18858 VN1R9P-201ENST00000614184 867 ntBASIC8.11□□□□□ -1.11
LIG1P18858 AL512427.1-201ENST00000618593 349 ntBASIC8.11□□□□□ -1.11
LIG1P18858 pRNA.9-201ENST00000618609 89 ntBASIC8.11□□□□□ -1.11
LIG1P18858 AC073488.7-201ENST00000633785 778 ntBASIC8.11□□□□□ -1.11
LIG1P18858 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC8.11□□□□□ -1.11
LIG1P18858 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 TPTE2P2-201ENST00000403471 1466 ntBASIC8.11□□□□□ -1.11
LIG1P18858 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC8.11□□□□□ -1.11
LIG1P18858 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
LIG1P18858 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LIG1P18858 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC8.1□□□□□ -1.11
LIG1P18858 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LIG1P18858 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LIG1P18858 AC022306.1-201ENST00000560489 1562 ntBASIC8.1□□□□□ -1.11
LIG1P18858 CASC19-238ENST00000641523 1558 ntBASIC8.1□□□□□ -1.11
LIG1P18858 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LIG1P18858 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LIG1P18858 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
LIG1P18858 RNU1-24P-201ENST00000364285 165 ntBASIC8.1□□□□□ -1.11
LIG1P18858 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
LIG1P18858 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC8.1□□□□□ -1.11
LIG1P18858 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
LIG1P18858 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LIG1P18858 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC8.1□□□□□ -1.11
LIG1P18858 MTND2P18-201ENST00000419962 1030 ntBASIC8.1□□□□□ -1.11
LIG1P18858 AC090960.1-201ENST00000421072 306 ntBASIC8.1□□□□□ -1.11
LIG1P18858 FABP5P1-201ENST00000423401 411 ntBASIC8.1□□□□□ -1.11
LIG1P18858 AF274573.1-201ENST00000430535 494 ntBASIC8.1□□□□□ -1.11
LIG1P18858 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC8.1□□□□□ -1.11
LIG1P18858 FABP5P2-201ENST00000439042 408 ntBASIC8.1□□□□□ -1.11
LIG1P18858 AC079781.1-201ENST00000441505 394 ntBASIC8.1□□□□□ -1.11
LIG1P18858 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC8.1□□□□□ -1.11
LIG1P18858 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC8.1□□□□□ -1.11
LIG1P18858 AC006326.1-201ENST00000445465 787 ntBASIC8.1□□□□□ -1.11
LIG1P18858 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LIG1P18858 PMS2P11-201ENST00000451831 574 ntBASIC8.1□□□□□ -1.11
LIG1P18858 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC8.1□□□□□ -1.11
LIG1P18858 AC018892.2-201ENST00000457656 693 ntBASIC8.1□□□□□ -1.11
LIG1P18858 RBMY2HP-201ENST00000457961 720 ntBASIC8.1□□□□□ -1.11
LIG1P18858 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC8.1□□□□□ -1.11
LIG1P18858 AC135721.2-201ENST00000464237 300 ntBASIC8.1□□□□□ -1.11
LIG1P18858 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC8.1□□□□□ -1.11
LIG1P18858 SSR3-206ENST00000476217 807 ntTSL 3 BASIC8.1□□□□□ -1.11
LIG1P18858 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LIG1P18858 OR9N1P-201ENST00000491296 333 ntBASIC8.1□□□□□ -1.11
LIG1P18858 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LIG1P18858 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC8.1□□□□□ -1.11
LIG1P18858 RN7SKP98-201ENST00000517070 156 ntBASIC8.1□□□□□ -1.11
LIG1P18858 AC090819.1-201ENST00000523800 1111 ntBASIC8.1□□□□□ -1.11
LIG1P18858 LDHC-204ENST00000536880 957 ntTSL 5 BASIC8.1□□□□□ -1.11
LIG1P18858 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC8.1□□□□□ -1.11
LIG1P18858 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC8.1□□□□□ -1.11
LIG1P18858 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC8.1□□□□□ -1.11
LIG1P18858 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC8.1□□□□□ -1.11
LIG1P18858 NDUFAF4P1-201ENST00000559425 519 ntBASIC8.1□□□□□ -1.11
LIG1P18858 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC8.1□□□□□ -1.11
LIG1P18858 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC8.1□□□□□ -1.11
LIG1P18858 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC8.1□□□□□ -1.11
LIG1P18858 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC8.1□□□□□ -1.11
LIG1P18858 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC8.1□□□□□ -1.11
LIG1P18858 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC8.1□□□□□ -1.11
LIG1P18858 AL022067.1-201ENST00000602426 454 ntBASIC8.1□□□□□ -1.11
LIG1P18858 AP002345.2-201ENST00000609961 904 ntBASIC8.1□□□□□ -1.11
LIG1P18858 AP005229.2-201ENST00000609980 697 ntBASIC8.1□□□□□ -1.11
LIG1P18858 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
LIG1P18858 uc_338.37-201ENST00000620113 186 ntBASIC8.1□□□□□ -1.11
LIG1P18858 AP003499.2-201ENST00000624100 483 ntBASIC8.1□□□□□ -1.11
LIG1P18858 AC005355.2-201ENST00000625064 484 ntBASIC8.1□□□□□ -1.11
LIG1P18858 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC8.1□□□□□ -1.11
LIG1P18858 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC8.1□□□□□ -1.11
LIG1P18858 AL139254.2-202ENST00000641937 1156 ntBASIC8.1□□□□□ -1.11
LIG1P18858 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC8.1□□□□□ -1.11
LIG1P18858 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
LIG1P18858 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC8.1□□□□□ -1.11
LIG1P18858 CTNNA1P1-201ENST00000515849 2728 ntBASIC8.1□□□□□ -1.11
LIG1P18858 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LIG1P18858 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LIG1P18858 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LIG1P18858 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LIG1P18858 AC021755.1-201ENST00000559747 1447 ntBASIC8.1□□□□□ -1.11
LIG1P18858 ASNSP6-201ENST00000592770 1618 ntBASIC8.1□□□□□ -1.11
LIG1P18858 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.1□□□□□ -1.11
LIG1P18858 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
LIG1P18858 AC007406.5-201ENST00000570140 3170 ntBASIC8.1□□□□□ -1.11
LIG1P18858 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LIG1P18858 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LIG1P18858 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LIG1P18858 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
LIG1P18858 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC8.09□□□□□ -1.11
LIG1P18858 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms