Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.18□□□□□ -1.58
CCL3L1P16619 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.18□□□□□ -1.58
CCL3L1P16619 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCL3L1P16619 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCL3L1P16619 AC022034.1-201ENST00000512867 2156 ntBASIC5.18□□□□□ -1.58
CCL3L1P16619 AC107980.1-201ENST00000558671 3355 ntBASIC5.18□□□□□ -1.58
CCL3L1P16619 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCL3L1P16619 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCL3L1P16619 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CCL3L1P16619 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCL3L1P16619 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCL3L1P16619 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.17□□□□□ -1.58
CCL3L1P16619 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCL3L1P16619 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.17□□□□□ -1.58
CCL3L1P16619 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.17□□□□□ -1.58
CCL3L1P16619 AL133243.2-201ENST00000610331 1621 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
CCL3L1P16619 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCL3L1P16619 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CCL3L1P16619 RNA5SP346-201ENST00000363541 121 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 MIR433-201ENST00000384837 93 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 RN7SKP121-201ENST00000410842 305 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 RNA5SP115-201ENST00000411160 107 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.17□□□□□ -1.58
CCL3L1P16619 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.17□□□□□ -1.58
CCL3L1P16619 AC094019.1-201ENST00000434678 472 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.17□□□□□ -1.58
CCL3L1P16619 RANP2-201ENST00000456833 229 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 RN7SL326P-201ENST00000477493 296 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 RN7SL568P-201ENST00000493069 298 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 AC113367.2-201ENST00000505749 160 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CCL3L1P16619 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.17□□□□□ -1.58
CCL3L1P16619 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.17□□□□□ -1.58
CCL3L1P16619 RNA5SP441-201ENST00000516809 88 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 RNA5SP400-201ENST00000517155 111 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 OR4A41P-201ENST00000533053 928 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 AC092865.1-201ENST00000544395 1023 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.17□□□□□ -1.58
CCL3L1P16619 BMS1P16-201ENST00000556075 1147 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 AC121758.1-202ENST00000556917 658 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.17□□□□□ -1.58
CCL3L1P16619 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.17□□□□□ -1.58
CCL3L1P16619 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.17□□□□□ -1.58
CCL3L1P16619 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCL3L1P16619 SNORA74.4-201ENST00000607595 199 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.17□□□□□ -1.58
CCL3L1P16619 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 AC022106.1-201ENST00000612834 766 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 AP001885.1-201ENST00000621658 558 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 AC022726.2-201ENST00000634673 547 ntBASIC5.17□□□□□ -1.58
CCL3L1P16619 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.17□□□□□ -1.58
CCL3L1P16619 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CCL3L1P16619 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCL3L1P16619 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCL3L1P16619 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCL3L1P16619 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCL3L1P16619 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.17□□□□□ -1.58
CCL3L1P16619 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCL3L1P16619 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.17□□□□□ -1.58
CCL3L1P16619 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCL3L1P16619 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.17□□□□□ -1.58
CCL3L1P16619 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCL3L1P16619 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.17□□□□□ -1.58
CCL3L1P16619 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC5.17□□□□□ -1.58
CCL3L1P16619 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCL3L1P16619 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCL3L1P16619 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCL3L1P16619 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCL3L1P16619 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC5.17□□□□□ -1.58
CCL3L1P16619 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.16□□□□□ -1.58
CCL3L1P16619 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCL3L1P16619 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCL3L1P16619 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.16□□□□□ -1.58
CCL3L1P16619 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCL3L1P16619 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCL3L1P16619 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.16□□□□□ -1.58
CCL3L1P16619 OR11H13P-201ENST00000359695 979 ntBASIC5.16□□□□□ -1.58
CCL3L1P16619 RN7SKP171-201ENST00000364417 303 ntBASIC5.16□□□□□ -1.58
CCL3L1P16619 MIR188-201ENST00000385034 86 ntBASIC5.16□□□□□ -1.58
CCL3L1P16619 RNU11-6P-201ENST00000391127 133 ntBASIC5.16□□□□□ -1.58
CCL3L1P16619 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CCL3L1P16619 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.16□□□□□ -1.58
CCL3L1P16619 AL353626.3-201ENST00000413399 657 ntBASIC5.16□□□□□ -1.58
CCL3L1P16619 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCL3L1P16619 BMP6P1-201ENST00000431230 679 ntBASIC5.16□□□□□ -1.58
CCL3L1P16619 AL645936.1-201ENST00000441979 518 ntBASIC5.16□□□□□ -1.58
CCL3L1P16619 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.16□□□□□ -1.58
CCL3L1P16619 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.16□□□□□ -1.58
CCL3L1P16619 SNX18P25-201ENST00000510539 758 ntBASIC5.16□□□□□ -1.58
CCL3L1P16619 ZNF519P4-201ENST00000514008 125 ntBASIC5.16□□□□□ -1.58
CCL3L1P16619 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.16□□□□□ -1.58
CCL3L1P16619 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.16□□□□□ -1.58
CCL3L1P16619 NPIPB14P-203ENST00000532298 987 ntBASIC5.16□□□□□ -1.58
CCL3L1P16619 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.16□□□□□ -1.58
CCL3L1P16619 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.16□□□□□ -1.58
CCL3L1P16619 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.16□□□□□ -1.58
CCL3L1P16619 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.16□□□□□ -1.58
CCL3L1P16619 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.16□□□□□ -1.58
CCL3L1P16619 AC244034.2-201ENST00000562504 509 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms