Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CD48P09326 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD48P09326 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD48P09326 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD48P09326 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.52□□□□□ -1.37
CD48P09326 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD48P09326 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.52□□□□□ -1.37
CD48P09326 RNA5SP514-201ENST00000363717 111 ntBASIC6.52□□□□□ -1.37
CD48P09326 RNA5SP77-201ENST00000365394 120 ntBASIC6.52□□□□□ -1.37
CD48P09326 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CD48P09326 AL157702.1-201ENST00000398764 426 ntBASIC6.52□□□□□ -1.37
CD48P09326 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
CD48P09326 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.52□□□□□ -1.37
CD48P09326 AL691447.1-201ENST00000419456 387 ntBASIC6.52□□□□□ -1.37
CD48P09326 RPL34P27-201ENST00000428810 349 ntBASIC6.52□□□□□ -1.37
CD48P09326 MRPS21P3-201ENST00000436696 262 ntBASIC6.52□□□□□ -1.37
CD48P09326 RPEP4-201ENST00000437636 602 ntBASIC6.52□□□□□ -1.37
CD48P09326 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.52□□□□□ -1.37
CD48P09326 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.52□□□□□ -1.37
CD48P09326 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.52□□□□□ -1.37
CD48P09326 AL022319.1-201ENST00000458183 1167 ntBASIC6.52□□□□□ -1.37
CD48P09326 AC115223.1-201ENST00000466377 870 ntBASIC6.52□□□□□ -1.37
CD48P09326 AC128716.1-201ENST00000475129 166 ntBASIC6.52□□□□□ -1.37
CD48P09326 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.52□□□□□ -1.37
CD48P09326 LDHBP3-201ENST00000514909 822 ntBASIC6.52□□□□□ -1.37
CD48P09326 RN7SKP248-201ENST00000516278 305 ntBASIC6.52□□□□□ -1.37
CD48P09326 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.52□□□□□ -1.37
CD48P09326 IGHV4-55-201ENST00000520889 368 ntBASIC6.52□□□□□ -1.37
CD48P09326 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.52□□□□□ -1.37
CD48P09326 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.52□□□□□ -1.37
CD48P09326 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.52□□□□□ -1.37
CD48P09326 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.52□□□□□ -1.37
CD48P09326 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.52□□□□□ -1.37
CD48P09326 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.52□□□□□ -1.37
CD48P09326 AC006924.1-201ENST00000610750 559 ntBASIC6.52□□□□□ -1.37
CD48P09326 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.52□□□□□ -1.37
CD48P09326 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.52□□□□□ -1.37
CD48P09326 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.52□□□□□ -1.37
CD48P09326 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD48P09326 AL161901.1-201ENST00000624954 3425 ntBASIC6.52□□□□□ -1.37
CD48P09326 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CD48P09326 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CD48P09326 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
CD48P09326 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD48P09326 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD48P09326 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CD48P09326 ZNF402P-201ENST00000404435 3100 ntBASIC6.52□□□□□ -1.37
CD48P09326 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD48P09326 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD48P09326 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.52□□□□□ -1.37
CD48P09326 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.51□□□□□ -1.37
CD48P09326 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD48P09326 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD48P09326 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD48P09326 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD48P09326 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD48P09326 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD48P09326 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD48P09326 SNORA64.3-201ENST00000365647 134 ntBASIC6.51□□□□□ -1.37
CD48P09326 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CD48P09326 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD48P09326 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.51□□□□□ -1.37
CD48P09326 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CD48P09326 AL035696.2-201ENST00000407941 709 ntBASIC6.51□□□□□ -1.37
CD48P09326 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.51□□□□□ -1.37
CD48P09326 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.51□□□□□ -1.37
CD48P09326 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.51□□□□□ -1.37
CD48P09326 GPN3P1-201ENST00000423883 535 ntBASIC6.51□□□□□ -1.37
CD48P09326 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.51□□□□□ -1.37
CD48P09326 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.51□□□□□ -1.37
CD48P09326 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.51□□□□□ -1.37
CD48P09326 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.51□□□□□ -1.37
CD48P09326 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.51□□□□□ -1.37
CD48P09326 RN7SL643P-201ENST00000471845 291 ntBASIC6.51□□□□□ -1.37
CD48P09326 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.51□□□□□ -1.37
CD48P09326 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD48P09326 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD48P09326 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.51□□□□□ -1.37
CD48P09326 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.51□□□□□ -1.37
CD48P09326 MIR744-201ENST00000578242 98 ntBASIC6.51□□□□□ -1.37
CD48P09326 MIR3157-201ENST00000578688 85 ntBASIC6.51□□□□□ -1.37
CD48P09326 RN7SL66P-201ENST00000582099 264 ntBASIC6.51□□□□□ -1.37
CD48P09326 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.51□□□□□ -1.37
CD48P09326 AC026898.1-201ENST00000586404 571 ntBASIC6.51□□□□□ -1.37
CD48P09326 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.51□□□□□ -1.37
CD48P09326 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.51□□□□□ -1.37
CD48P09326 MIR7159-201ENST00000620587 66 ntBASIC6.51□□□□□ -1.37
CD48P09326 AC089999.3-201ENST00000622440 577 ntBASIC6.51□□□□□ -1.37
CD48P09326 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.51□□□□□ -1.37
CD48P09326 HDAC1P2-201ENST00000453661 1398 ntBASIC6.51□□□□□ -1.37
CD48P09326 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CD48P09326 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD48P09326 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD48P09326 HSPD1P8-201ENST00000400121 1658 ntBASIC6.51□□□□□ -1.37
CD48P09326 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
CD48P09326 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CD48P09326 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD48P09326 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD48P09326 AC092692.1-201ENST00000623625 2595 ntBASIC6.51□□□□□ -1.37
CD48P09326 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms