Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 MIR1273F-201ENST00000580581 99 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AL035417.2-201ENST00000603887 796 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 AC005070.2-201ENST00000604391 260 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 MIR6736-201ENST00000616799 59 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 BX005040.2-201ENST00000620504 370 ntBASIC4.75□□□□□ -1.65
HLA-DQA1P01909 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1P01909 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AC004076.2-201ENST00000620532 3323 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AP000473.2-201ENST00000602659 1537 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AC026523.2-201ENST00000625039 7739 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 SNORA5.1-201ENST00000384275 131 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 RN7SKP236-201ENST00000410635 284 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 RPS27AP6-201ENST00000427962 448 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AC018804.1-201ENST00000430381 618 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 USP24P1-201ENST00000433802 779 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 SLC25A24P1-202ENST00000434803 1220 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 SERPINA7P1-201ENST00000443077 631 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 VNN3-210ENST00000450865 596 ntTSL 4 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AC022730.1-201ENST00000473114 568 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 CHCHD2P7-201ENST00000508008 452 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AC106800.3-201ENST00000511389 308 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 RPS20-202ENST00000518875 671 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AC009120.3-201ENST00000563335 499 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AC006120.1-201ENST00000579375 546 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 SETP3-201ENST00000581726 813 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AP006587.6-201ENST00000582128 1091 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AC010503.3-201ENST00000594355 540 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 OR7A8P-201ENST00000595427 913 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AC012640.3-201ENST00000607847 430 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 5S_rRNA.23-201ENST00000612086 102 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 RACK1-235ENST00000626067 564 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AC079776.5-201ENST00000641920 211 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 AC027279.4-201ENST00000624371 2072 ntBASIC4.74□□□□□ -1.65
HLA-DQA1P01909 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DQA1P01909 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 RN7SKP81-201ENST00000365603 331 ntBASIC4.73□□□□□ -1.65
HLA-DQA1P01909 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQA1P01909 AC010740.1-201ENST00000417035 684 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms