Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC2.65□□□□□ -1.99
USH2AO75445 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC2.65□□□□□ -1.99
USH2AO75445 AC010435.1-201ENST00000623353 1177 ntBASIC2.65□□□□□ -1.99
USH2AO75445 AL390318.1-201ENST00000624564 687 ntBASIC2.65□□□□□ -1.99
USH2AO75445 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
USH2AO75445 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC2.65□□□□□ -1.99
USH2AO75445 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC2.65□□□□□ -1.99
USH2AO75445 CASC19-281ENST00000642118 1554 ntBASIC2.65□□□□□ -1.99
USH2AO75445 AL157831.2-201ENST00000564681 3095 ntBASIC2.65□□□□□ -1.99
USH2AO75445 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 MAPKBP1-202ENST00000457542 7232 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC2.65□□□□□ -1.99
USH2AO75445 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
USH2AO75445 SNORA51.8-201ENST00000384234 132 ntBASIC2.65□□□□□ -1.99
USH2AO75445 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 AL050305.1-201ENST00000399993 1230 ntBASIC2.65□□□□□ -1.99
USH2AO75445 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC2.65□□□□□ -1.99
USH2AO75445 AC068138.1-201ENST00000412635 217 ntBASIC2.65□□□□□ -1.99
USH2AO75445 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC2.65□□□□□ -1.99
USH2AO75445 RPL36P18-201ENST00000419316 318 ntBASIC2.65□□□□□ -1.99
USH2AO75445 AC011753.3-201ENST00000443436 406 ntBASIC2.65□□□□□ -1.99
USH2AO75445 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC2.65□□□□□ -1.99
USH2AO75445 AC012512.1-201ENST00000446594 718 ntBASIC2.65□□□□□ -1.99
USH2AO75445 MORF4-201ENST00000447135 971 ntBASIC2.65□□□□□ -1.99
USH2AO75445 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC2.65□□□□□ -1.99
USH2AO75445 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC2.65□□□□□ -1.99
USH2AO75445 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC2.65□□□□□ -1.99
USH2AO75445 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC2.65□□□□□ -1.99
USH2AO75445 AC120057.5-201ENST00000623840 154 ntBASIC2.65□□□□□ -1.99
USH2AO75445 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC2.65□□□□□ -1.99
USH2AO75445 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
USH2AO75445 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC2.65□□□□□ -1.99
USH2AO75445 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 AP001541.1-201ENST00000623322 1904 ntBASIC2.65□□□□□ -1.99
USH2AO75445 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 AC104118.1-201ENST00000607625 1589 ntBASIC2.65□□□□□ -1.99
USH2AO75445 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 ZNF442-201ENST00000242804 6219 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
USH2AO75445 AC026464.2-201ENST00000567834 2421 ntBASIC2.65□□□□□ -1.99
USH2AO75445 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
USH2AO75445 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
USH2AO75445 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 ALB-219ENST00000621085 1418 ntTSL 5 BASIC2.65□□□□□ -1.99
USH2AO75445 IL24-207ENST00000611909 1621 ntTSL 3 BASIC2.65□□□□□ -1.99
USH2AO75445 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
USH2AO75445 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
USH2AO75445 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC2.65□□□□□ -1.99
USH2AO75445 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 RNU6ATAC18P-201ENST00000408413 101 ntBASIC2.65□□□□□ -1.99
USH2AO75445 U3.36-201ENST00000408418 213 ntBASIC2.65□□□□□ -1.99
USH2AO75445 USP9YP9-201ENST00000429406 715 ntBASIC2.65□□□□□ -1.99
USH2AO75445 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC2.65□□□□□ -1.99
USH2AO75445 RPL7P45-201ENST00000455851 743 ntBASIC2.65□□□□□ -1.99
USH2AO75445 AC002075.1-201ENST00000457396 676 ntBASIC2.65□□□□□ -1.99
USH2AO75445 RN7SL561P-201ENST00000488553 281 ntBASIC2.65□□□□□ -1.99
USH2AO75445 RN7SL57P-201ENST00000493687 290 ntBASIC2.65□□□□□ -1.99
USH2AO75445 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 C1GALT1P3-201ENST00000522049 819 ntBASIC2.65□□□□□ -1.99
USH2AO75445 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC2.65□□□□□ -1.99
USH2AO75445 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
USH2AO75445 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
USH2AO75445 GUCY1B2-204ENST00000531898 1979 ntBASIC2.64□□□□□ -1.99
USH2AO75445 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
USH2AO75445 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
USH2AO75445 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 AC114786.1-201ENST00000512892 1415 ntBASIC2.64□□□□□ -1.99
USH2AO75445 AGPAT4-201ENST00000320285 7865 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 VPS8-227ENST00000625842 4969 ntAPPRIS P4 TSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 CUL9-202ENST00000372647 7684 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
USH2AO75445 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC2.64□□□□□ -1.99
USH2AO75445 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC2.64□□□□□ -1.99
USH2AO75445 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
USH2AO75445 MIR433-201ENST00000384837 93 ntBASIC2.64□□□□□ -1.99
USH2AO75445 PRELID1P2-201ENST00000407805 396 ntBASIC2.64□□□□□ -1.99
USH2AO75445 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 ZDHHC20P1-204ENST00000435787 423 ntBASIC2.64□□□□□ -1.99
USH2AO75445 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms