Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RPL7P58-201ENST00000402913 758 ntBASIC5.94□□□□□ -1.46
SSX4O60224 AL353133.1-201ENST00000407695 401 ntBASIC5.94□□□□□ -1.46
SSX4O60224 RNA5SP155-201ENST00000411154 129 ntBASIC5.94□□□□□ -1.46
SSX4O60224 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.94□□□□□ -1.46
SSX4O60224 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 VN1R66P-201ENST00000412929 916 ntBASIC5.94□□□□□ -1.46
SSX4O60224 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5.94□□□□□ -1.46
SSX4O60224 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 LINC00328-2P-201ENST00000436585 219 ntBASIC5.94□□□□□ -1.46
SSX4O60224 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.94□□□□□ -1.46
SSX4O60224 AL355355.1-201ENST00000442900 793 ntBASIC5.94□□□□□ -1.46
SSX4O60224 AL031681.1-201ENST00000443304 400 ntBASIC5.94□□□□□ -1.46
SSX4O60224 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX4O60224 SULT1D1P-201ENST00000458020 882 ntBASIC5.94□□□□□ -1.46
SSX4O60224 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX4O60224 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.94□□□□□ -1.46
SSX4O60224 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 AC011352.2-201ENST00000514574 1016 ntBASIC5.94□□□□□ -1.46
SSX4O60224 RN7SKP67-201ENST00000515905 235 ntBASIC5.94□□□□□ -1.46
SSX4O60224 RN7SKP11-201ENST00000517018 287 ntBASIC5.94□□□□□ -1.46
SSX4O60224 RNA5SP278-201ENST00000517055 102 ntBASIC5.94□□□□□ -1.46
SSX4O60224 AP001804.1-201ENST00000526868 919 ntBASIC5.94□□□□□ -1.46
SSX4O60224 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC5.94□□□□□ -1.46
SSX4O60224 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 AC107993.1-201ENST00000591343 684 ntBASIC5.94□□□□□ -1.46
SSX4O60224 BNIP3P7-201ENST00000605641 516 ntBASIC5.94□□□□□ -1.46
SSX4O60224 AC091167.5-201ENST00000605689 894 ntBASIC5.94□□□□□ -1.46
SSX4O60224 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.94□□□□□ -1.46
SSX4O60224 AL137000.1-201ENST00000610528 1244 ntBASIC5.94□□□□□ -1.46
SSX4O60224 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.94□□□□□ -1.46
SSX4O60224 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 AC127071.1-201ENST00000624997 712 ntBASIC5.94□□□□□ -1.46
SSX4O60224 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.94□□□□□ -1.46
SSX4O60224 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.94□□□□□ -1.46
SSX4O60224 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SSX4O60224 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX4O60224 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SSX4O60224 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX4O60224 AC011455.2-201ENST00000599320 3336 ntBASIC5.94□□□□□ -1.46
SSX4O60224 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SSX4O60224 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX4O60224 C1D-202ENST00000407324 1379 ntTSL 3 BASIC5.93□□□□□ -1.46
SSX4O60224 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.93□□□□□ -1.46
SSX4O60224 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSX4O60224 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SSX4O60224 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.93□□□□□ -1.46
SSX4O60224 AC011369.2-201ENST00000624423 1567 ntBASIC5.93□□□□□ -1.46
SSX4O60224 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSX4O60224 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSX4O60224 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.93□□□□□ -1.46
SSX4O60224 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SSX4O60224 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.93□□□□□ -1.46
SSX4O60224 RN7SKP191-201ENST00000364713 306 ntBASIC5.93□□□□□ -1.46
SSX4O60224 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.93□□□□□ -1.46
SSX4O60224 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SSX4O60224 RAB5CP1-201ENST00000395972 580 ntBASIC5.93□□□□□ -1.46
SSX4O60224 NPM1P10-201ENST00000398310 865 ntBASIC5.93□□□□□ -1.46
SSX4O60224 AL359715.1-201ENST00000404330 555 ntBASIC5.93□□□□□ -1.46
SSX4O60224 RN7SKP91-201ENST00000410852 288 ntBASIC5.93□□□□□ -1.46
SSX4O60224 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.93□□□□□ -1.46
SSX4O60224 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.93□□□□□ -1.46
SSX4O60224 AL596268.1-201ENST00000427910 1048 ntBASIC5.93□□□□□ -1.46
SSX4O60224 AC018804.1-201ENST00000430381 618 ntBASIC5.93□□□□□ -1.46
SSX4O60224 MYL6P3-201ENST00000436904 432 ntBASIC5.93□□□□□ -1.46
SSX4O60224 RPS18P1-201ENST00000447840 458 ntBASIC5.93□□□□□ -1.46
SSX4O60224 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.93□□□□□ -1.46
SSX4O60224 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.93□□□□□ -1.46
SSX4O60224 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.93□□□□□ -1.46
SSX4O60224 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.93□□□□□ -1.46
SSX4O60224 PSMA6P2-201ENST00000457574 686 ntBASIC5.93□□□□□ -1.46
SSX4O60224 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.93□□□□□ -1.46
SSX4O60224 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC5.93□□□□□ -1.46
SSX4O60224 RN7SL390P-201ENST00000470634 284 ntBASIC5.93□□□□□ -1.46
SSX4O60224 UOX-201ENST00000471089 899 ntBASIC5.93□□□□□ -1.46
SSX4O60224 TRBV8-1-201ENST00000481590 279 ntBASIC5.93□□□□□ -1.46
SSX4O60224 RN7SL797P-201ENST00000486314 297 ntBASIC5.93□□□□□ -1.46
SSX4O60224 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.93□□□□□ -1.46
SSX4O60224 AC087752.2-201ENST00000521219 281 ntBASIC5.93□□□□□ -1.46
SSX4O60224 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC5.93□□□□□ -1.46
SSX4O60224 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSX4O60224 OR4C49P-201ENST00000563891 900 ntBASIC5.93□□□□□ -1.46
SSX4O60224 EIF4A3P1-201ENST00000578499 647 ntBASIC5.93□□□□□ -1.46
SSX4O60224 AL049840.6-201ENST00000604583 345 ntBASIC5.93□□□□□ -1.46
SSX4O60224 GMCL1P2-201ENST00000605230 823 ntBASIC5.93□□□□□ -1.46
SSX4O60224 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.93□□□□□ -1.46
SSX4O60224 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.93□□□□□ -1.46
SSX4O60224 AL118556.2-201ENST00000614375 824 ntBASIC5.93□□□□□ -1.46
SSX4O60224 U1.41-201ENST00000617626 165 ntBASIC5.93□□□□□ -1.46
SSX4O60224 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.93□□□□□ -1.46
SSX4O60224 MIR6503-201ENST00000622884 86 ntBASIC5.93□□□□□ -1.46
SSX4O60224 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.93□□□□□ -1.46
SSX4O60224 AC007485.2-201ENST00000623493 1667 ntBASIC5.93□□□□□ -1.46
SSX4O60224 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.93□□□□□ -1.46
SSX4O60224 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.93□□□□□ -1.46
SSX4O60224 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.93□□□□□ -1.46
SSX4O60224 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms