Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SUMO2P10-201ENST00000452006 288 ntBASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 AC112187.1-201ENST00000455837 479 ntBASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 RN7SL83P-201ENST00000468131 297 ntBASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 RN7SL369P-201ENST00000477138 299 ntBASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 AC122714.1-201ENST00000502510 459 ntBASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 AC092865.1-201ENST00000544395 1023 ntBASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 AC103968.1-201ENST00000557841 573 ntBASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 NIFKP4-201ENST00000567275 1192 ntBASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 NPIPB1P-202ENST00000588786 828 ntBASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 AL589743.6-201ENST00000611025 117 ntBASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRAV27A0A087WT01 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.65□□□□□ -1.51
TRAV27A0A087WT01 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRAV27A0A087WT01 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRAV27A0A087WT01 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
TRAV27A0A087WT01 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRAV27A0A087WT01 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRAV27A0A087WT01 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.65□□□□□ -1.51
TRAV27A0A087WT01 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC5.65□□□□□ -1.51
TRAV27A0A087WT01 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
TRAV27A0A087WT01 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRAV27A0A087WT01 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRAV27A0A087WT01 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
TRAV27A0A087WT01 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.65□□□□□ -1.51
TRAV27A0A087WT01 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
TRAV27A0A087WT01 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRAV27A0A087WT01 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 GTF3AP6-201ENST00000432585 986 ntBASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 NPM1P23-201ENST00000440193 849 ntBASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 RPL31P11-202ENST00000454082 372 ntBASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 RPL7L1P3-201ENST00000455249 689 ntBASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 AL355032.1-201ENST00000472981 438 ntBASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 RN7SL267P-201ENST00000485107 261 ntBASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 AC093325.1-201ENST00000508378 326 ntBASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 RNA5SP96-201ENST00000516041 107 ntBASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 RPA2P3-201ENST00000533268 770 ntBASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 AL390877.1-201ENST00000605704 214 ntBASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 MIR6503-201ENST00000622884 86 ntBASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 CLUHP10-201ENST00000631979 980 ntBASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 OR7E91P-202ENST00000642062 1198 ntBASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAV27A0A087WT01 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC022164.1-201ENST00000568767 2673 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 ZNF658B-201ENST00000602828 3408 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms