Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 EIF3K-211ENST00000592558 670 ntTSL 2 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 AC010359.1-201ENST00000602982 507 ntBASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 AC133552.5-201ENST00000604266 540 ntBASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 NDUFB9P1-201ENST00000604683 510 ntBASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 HIST1H2BJ-203ENST00000607124 950 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 AC107294.2-201ENST00000610001 701 ntTSL 3 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 GOLGA6L17P-201ENST00000611297 586 ntTSL 4 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 AC103974.2-201ENST00000611319 778 ntBASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 U3.50-201ENST00000611947 228 ntBASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 FRG1HP-203ENST00000615326 593 ntTSL 3 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 LINC00901.1-201ENST00000617252 152 ntBASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 AC242842.1-201ENST00000617712 447 ntTSL 3 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 AC048380.3-201ENST00000623145 796 ntBASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 AC073488.11-201ENST00000633298 754 ntBASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 AC126323.6-202ENST00000568092 3511 ntBASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 TRIM51GP-201ENST00000534741 1350 ntBASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 EEF1A1P22-201ENST00000559385 1380 ntBASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 AL359091.1-201ENST00000449048 1734 ntBASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 AC104964.3-201ENST00000606115 2860 ntBASIC3.1□□□□□ -1.91
LINC01558Q9Y6Z2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 HSPD1P9-201ENST00000420325 1636 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 UGT2B26P-201ENST00000508672 1613 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AC005332.5-201ENST00000591222 2919 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AC007618.1-201ENST00000366455 732 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 RNA5SP241-201ENST00000391326 114 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 MIR1208-201ENST00000408334 73 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AC111200.2-201ENST00000418877 505 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 HCG25-217ENST00000422366 702 ntTSL 3 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AC011999.1-201ENST00000424794 1024 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 PRUNEP1-201ENST00000425846 705 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 FAF2P1-201ENST00000429974 1298 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AL645936.2-201ENST00000430565 928 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AL669970.1-201ENST00000444936 450 ntTSL 2 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AL135924.1-201ENST00000446146 423 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 MYL6P4-201ENST00000477911 453 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AC022415.1-202ENST00000486612 523 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 OR7E163P-201ENST00000505943 894 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 PPIAP11-201ENST00000510729 493 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 S100Z-202ENST00000513010 1017 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 TCP11X3P-202ENST00000514289 1254 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 TPM3P3-201ENST00000521343 354 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AC244131.1-201ENST00000542152 922 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AC006927.1-201ENST00000544818 498 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AC125612.1-201ENST00000547580 377 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 LINC01490-201ENST00000548705 638 ntTSL 3 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AC006349.1-201ENST00000555526 235 ntBASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 PSMA3-AS1-211ENST00000556225 839 ntTSL 4 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC3.09□□□□□ -1.91
LINC01558Q9Y6Z2 AC007346.2-201ENST00000564816 892 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms