Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AC004656.1-201ENST00000568479 4951 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 RNA5SP152-201ENST00000365184 110 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 RNA5SP427-201ENST00000365323 119 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AL391419.1-201ENST00000398901 1275 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 SOD1P1-201ENST00000407803 440 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 RN7SKP129-201ENST00000410288 299 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 RN7SKP30-201ENST00000411373 334 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AL139184.1-202ENST00000422303 222 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AC000089.1-201ENST00000424559 801 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 RBMY2JP-201ENST00000425544 1059 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 CR391992.1-201ENST00000438601 394 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AC092421.1-201ENST00000448148 418 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 VPS25P1-201ENST00000455691 508 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 RNA5SP400-201ENST00000517155 111 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 CARSP2-201ENST00000520688 277 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 MIR4800-201ENST00000537353 80 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AC245052.7-201ENST00000601161 359 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AC019257.2-201ENST00000605539 497 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 MIR6762-201ENST00000613340 86 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 MIR6085-201ENST00000618314 110 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AL355480.4-201ENST00000626823 69 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 CCNT2P1-201ENST00000423082 1315 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 AL137141.1-201ENST00000624622 4836 ntBASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNBIP1Q9NSA3 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.15□□□□□ -1.58
CTNNBIP1Q9NSA3 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
CTNNBIP1Q9NSA3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CTNNBIP1Q9NSA3 AC005725.1-201ENST00000577346 2607 ntBASIC5.15□□□□□ -1.58
CTNNBIP1Q9NSA3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
CTNNBIP1Q9NSA3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.15□□□□□ -1.58
CTNNBIP1Q9NSA3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CTNNBIP1Q9NSA3 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.15□□□□□ -1.58
CTNNBIP1Q9NSA3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.15□□□□□ -1.58
CTNNBIP1Q9NSA3 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
CTNNBIP1Q9NSA3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CTNNBIP1Q9NSA3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CTNNBIP1Q9NSA3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 RNA5SP355-201ENST00000365317 135 ntBASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 GNG5P2-201ENST00000372054 207 ntBASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 AC074375.1-201ENST00000372993 192 ntBASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 RNU11-6P-201ENST00000391127 133 ntBASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 RN7SKP151-201ENST00000410230 316 ntBASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 MRPS21P5-201ENST00000417885 231 ntBASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 AC016027.5-201ENST00000427227 210 ntBASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 PHBP4-201ENST00000437447 837 ntBASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.15□□□□□ -1.59
CTNNBIP1Q9NSA3 SUMO2P4-201ENST00000504193 276 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms