Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AL022237.1-201ENST00000446663 358 ntBASIC9.05□□□□□ -0.96
SIN3AQ96ST3 AC017007.3-201ENST00000479865 435 ntBASIC9.05□□□□□ -0.96
SIN3AQ96ST3 AC021006.1-201ENST00000489849 553 ntBASIC9.05□□□□□ -0.96
SIN3AQ96ST3 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC9.05□□□□□ -0.96
SIN3AQ96ST3 AC091874.2-201ENST00000505889 720 ntBASIC9.05□□□□□ -0.96
SIN3AQ96ST3 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC9.05□□□□□ -0.96
SIN3AQ96ST3 AC010343.2-201ENST00000510162 224 ntBASIC9.05□□□□□ -0.96
SIN3AQ96ST3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC9.05□□□□□ -0.96
SIN3AQ96ST3 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SIN3AQ96ST3 AC023310.2-201ENST00000553844 547 ntBASIC9.05□□□□□ -0.96
SIN3AQ96ST3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC9.05□□□□□ -0.96
SIN3AQ96ST3 MRPS21P8-201ENST00000569196 235 ntBASIC9.05□□□□□ -0.96
SIN3AQ96ST3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC9.05□□□□□ -0.96
SIN3AQ96ST3 AC124916.2-201ENST00000604416 224 ntBASIC9.05□□□□□ -0.96
SIN3AQ96ST3 AL021368.3-201ENST00000607119 578 ntBASIC9.05□□□□□ -0.96
SIN3AQ96ST3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC9.05□□□□□ -0.96
SIN3AQ96ST3 AL109924.4-201ENST00000623089 670 ntBASIC9.05□□□□□ -0.96
SIN3AQ96ST3 AL034408.1-201ENST00000637712 664 ntBASIC9.05□□□□□ -0.96
SIN3AQ96ST3 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC9.05□□□□□ -0.96
SIN3AQ96ST3 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SIN3AQ96ST3 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 AC096921.2-201ENST00000561507 1916 ntBASIC9.04□□□□□ -0.96
SIN3AQ96ST3 AL139805.1-201ENST00000407837 289 ntBASIC9.04□□□□□ -0.96
SIN3AQ96ST3 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 RPL36P18-201ENST00000419316 318 ntBASIC9.04□□□□□ -0.96
SIN3AQ96ST3 AL354707.3-201ENST00000427308 331 ntBASIC9.04□□□□□ -0.96
SIN3AQ96ST3 PPIA-203ENST00000451562 544 ntTSL 2 BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 RPL12P7-201ENST00000493832 494 ntBASIC9.04□□□□□ -0.96
SIN3AQ96ST3 MTND6P8-201ENST00000503471 522 ntBASIC9.04□□□□□ -0.96
SIN3AQ96ST3 AC113367.2-201ENST00000505749 160 ntBASIC9.04□□□□□ -0.96
SIN3AQ96ST3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC9.04□□□□□ -0.96
SIN3AQ96ST3 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 AL353763.1-201ENST00000624467 1628 ntBASIC9.03□□□□□ -0.96
SIN3AQ96ST3 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 AC107977.1-201ENST00000355745 939 ntBASIC9.03□□□□□ -0.96
SIN3AQ96ST3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 RNA5SP350-201ENST00000363298 111 ntBASIC9.03□□□□□ -0.96
SIN3AQ96ST3 TMA16P2-201ENST00000413187 601 ntBASIC9.03□□□□□ -0.96
SIN3AQ96ST3 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 AC023141.3-201ENST00000436698 278 ntBASIC9.03□□□□□ -0.96
SIN3AQ96ST3 AL645936.1-201ENST00000441979 518 ntBASIC9.03□□□□□ -0.96
SIN3AQ96ST3 AC010240.2-201ENST00000445363 1205 ntBASIC9.03□□□□□ -0.96
SIN3AQ96ST3 AC068491.1-201ENST00000449539 1241 ntBASIC9.03□□□□□ -0.96
SIN3AQ96ST3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 RNA5SP434-201ENST00000516647 121 ntBASIC9.03□□□□□ -0.96
SIN3AQ96ST3 RN7SKP35-201ENST00000517210 151 ntBASIC9.03□□□□□ -0.96
SIN3AQ96ST3 IGHV1-14-201ENST00000523391 241 ntBASIC9.03□□□□□ -0.96
SIN3AQ96ST3 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 OSTC-205ENST00000613215 876 ntTSL 2 BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SIN3AQ96ST3 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
SIN3AQ96ST3 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC9.02□□□□□ -0.96
SIN3AQ96ST3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 CAV1-204ENST00000393470 598 ntTSL 4 BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 SMARCE1P6-201ENST00000398372 1216 ntBASIC9.02□□□□□ -0.97
SIN3AQ96ST3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 AC007568.1-201ENST00000422912 471 ntBASIC9.02□□□□□ -0.97
SIN3AQ96ST3 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 HSD3BP3-201ENST00000514706 994 ntBASIC9.02□□□□□ -0.97
SIN3AQ96ST3 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC9.02□□□□□ -0.97
SIN3AQ96ST3 OR4H6P-201ENST00000563771 921 ntBASIC9.02□□□□□ -0.97
SIN3AQ96ST3 AL683813.2-201ENST00000605245 502 ntBASIC9.02□□□□□ -0.97
SIN3AQ96ST3 AL137067.2-201ENST00000621202 131 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms