Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RNA5SP152-201ENST00000365184 110 ntBASIC6.4□□□□□ -1.38
VMP1Q96GC9 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VMP1Q96GC9 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VMP1Q96GC9 SNORA70H-201ENST00000383910 135 ntBASIC6.4□□□□□ -1.38
VMP1Q96GC9 SNORA70J-201ENST00000384182 135 ntBASIC6.4□□□□□ -1.38
VMP1Q96GC9 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 E2F6P1-201ENST00000428850 745 ntBASIC6.4□□□□□ -1.38
VMP1Q96GC9 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VMP1Q96GC9 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VMP1Q96GC9 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 RN7SL654P-201ENST00000479178 292 ntBASIC6.4□□□□□ -1.38
VMP1Q96GC9 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VMP1Q96GC9 IGKV2D-38-201ENST00000518423 240 ntBASIC6.4□□□□□ -1.38
VMP1Q96GC9 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 AC068408.1-201ENST00000577406 1144 ntBASIC6.4□□□□□ -1.38
VMP1Q96GC9 AC087575.1-201ENST00000585087 229 ntBASIC6.4□□□□□ -1.38
VMP1Q96GC9 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VMP1Q96GC9 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 AC020914.7-201ENST00000594477 545 ntBASIC6.4□□□□□ -1.38
VMP1Q96GC9 AC004908.1-201ENST00000606572 541 ntBASIC6.4□□□□□ -1.38
VMP1Q96GC9 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VMP1Q96GC9 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VMP1Q96GC9 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 AC119674.1-204ENST00000641348 1343 ntBASIC6.4□□□□□ -1.39
VMP1Q96GC9 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.4□□□□□ -1.39
VMP1Q96GC9 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
VMP1Q96GC9 MTCO1P22-201ENST00000604619 1360 ntBASIC6.4□□□□□ -1.39
VMP1Q96GC9 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
VMP1Q96GC9 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
VMP1Q96GC9 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
VMP1Q96GC9 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
VMP1Q96GC9 AC095038.1-201ENST00000429248 1591 ntBASIC6.4□□□□□ -1.39
VMP1Q96GC9 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
VMP1Q96GC9 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VMP1Q96GC9 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 AC009779.8-201ENST00000641684 4384 ntBASIC6.39□□□□□ -1.39
VMP1Q96GC9 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VMP1Q96GC9 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VMP1Q96GC9 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VMP1Q96GC9 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VMP1Q96GC9 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
VMP1Q96GC9 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VMP1Q96GC9 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VMP1Q96GC9 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 LDHAP5-201ENST00000394996 622 ntBASIC6.39□□□□□ -1.39
VMP1Q96GC9 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 PTP4A1P1-201ENST00000420539 515 ntBASIC6.39□□□□□ -1.39
VMP1Q96GC9 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VMP1Q96GC9 RN7SL216P-201ENST00000471607 298 ntBASIC6.39□□□□□ -1.39
VMP1Q96GC9 AC098583.1-201ENST00000480875 255 ntBASIC6.39□□□□□ -1.39
VMP1Q96GC9 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VMP1Q96GC9 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 RN7SL350P-201ENST00000492591 299 ntBASIC6.39□□□□□ -1.39
VMP1Q96GC9 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.39□□□□□ -1.39
VMP1Q96GC9 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VMP1Q96GC9 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 DIMT1P1-201ENST00000603970 763 ntBASIC6.39□□□□□ -1.39
VMP1Q96GC9 AC015660.5-201ENST00000623238 564 ntBASIC6.39□□□□□ -1.39
VMP1Q96GC9 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VMP1Q96GC9 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VMP1Q96GC9 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VMP1Q96GC9 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VMP1Q96GC9 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.39□□□□□ -1.39
VMP1Q96GC9 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms