Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 XCR1-201ENST00000309285 5281 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-CQ95604 PPP2R1B-201ENST00000311129 2082 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-CQ95604 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC8.51□□□□□ -1.05
HLA-CQ95604 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
HLA-CQ95604 RN7SKP184-201ENST00000362348 333 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-CQ95604 RNU6-248P-201ENST00000410720 107 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 AC068138.1-201ENST00000412635 217 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 AC244157.1-201ENST00000415642 163 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC8.51□□□□□ -1.05
HLA-CQ95604 CCNB1IP1P1-201ENST00000428976 839 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 AL512649.1-201ENST00000428997 581 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC8.51□□□□□ -1.05
HLA-CQ95604 YWHAEP5-201ENST00000431545 765 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 AL050321.1-201ENST00000432363 400 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 RPS25P9-201ENST00000435591 252 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 OSTCP2-201ENST00000437956 444 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-CQ95604 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC8.51□□□□□ -1.05
HLA-CQ95604 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC8.51□□□□□ -1.05
HLA-CQ95604 TAAR3P-201ENST00000466706 1078 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 AP002884.1-201ENST00000479691 655 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 TAAR3P-202ENST00000481759 1025 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 LARP1BP2-201ENST00000486594 519 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 AC019235.1-201ENST00000503847 207 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC8.51□□□□□ -1.05
HLA-CQ95604 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
HLA-CQ95604 AC108865.1-201ENST00000507644 496 ntTSL 3 BASIC8.51□□□□□ -1.05
HLA-CQ95604 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.51□□□□□ -1.05
HLA-CQ95604 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC8.51□□□□□ -1.05
HLA-CQ95604 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC8.51□□□□□ -1.05
HLA-CQ95604 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-CQ95604 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
HLA-CQ95604 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC8.51□□□□□ -1.05
HLA-CQ95604 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC8.51□□□□□ -1.05
HLA-CQ95604 RN7SL381P-201ENST00000577658 298 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC8.51□□□□□ -1.05
HLA-CQ95604 SIGLEC31P-201ENST00000594237 551 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC8.51□□□□□ -1.05
HLA-CQ95604 AP001554.1-201ENST00000604533 376 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC8.51□□□□□ -1.05
HLA-CQ95604 AC024560.3-201ENST00000608482 349 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 HTR1DP1-201ENST00000616500 888 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 AL138693.1-201ENST00000622219 129 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
HLA-CQ95604 EYA1-204ENST00000388741 3404 ntTSL 5 BASIC8.51□□□□□ -1.05
HLA-CQ95604 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
HLA-CQ95604 AL133320.1-201ENST00000621423 2352 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
HLA-CQ95604 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-CQ95604 UBE3B-207ENST00000537063 3600 ntTSL 3 BASIC8.51□□□□□ -1.05
HLA-CQ95604 AC008817.1-201ENST00000504215 1562 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 UTRN-203ENST00000367526 3220 ntTSL 5 BASIC8.51□□□□□ -1.05
HLA-CQ95604 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-CQ95604 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC8.51□□□□□ -1.05
HLA-CQ95604 NCOA4P4-201ENST00000513338 1861 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-CQ95604 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
HLA-CQ95604 AC105342.1-201ENST00000378334 6848 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
HLA-CQ95604 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
HLA-CQ95604 MAGOHB-201ENST00000320756 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-CQ95604 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-CQ95604 STPG1-203ENST00000374409 2804 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
HLA-CQ95604 LYARP1-201ENST00000436977 1501 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 CD36-214ENST00000447544 2298 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
HLA-CQ95604 WISP3-204ENST00000368666 2700 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-CQ95604 AL627309.1-201ENST00000466430 2748 ntTSL 5 BASIC8.5□□□□□ -1.05
HLA-CQ95604 UBQLN2-201ENST00000338222 4230 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
HLA-CQ95604 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-CQ95604 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
HLA-CQ95604 EGFLAM-201ENST00000322350 4411 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-CQ95604 S100A13-201ENST00000339556 514 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
HLA-CQ95604 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
HLA-CQ95604 RN7SKP63-201ENST00000363187 301 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 RNU6-534P-201ENST00000364877 106 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 MIR142-201ENST00000384835 87 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 MTCO3P40-201ENST00000392516 676 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-CQ95604 RN7SKP221-201ENST00000410420 301 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 RN7SKP131-201ENST00000410698 301 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC8.5□□□□□ -1.05
HLA-CQ95604 HMGB3P23-201ENST00000414981 585 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 AIMP1P1-201ENST00000418670 937 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 GUSBP4-201ENST00000423899 672 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 SNX19-202ENST00000426933 888 ntTSL 2 BASIC8.5□□□□□ -1.05
HLA-CQ95604 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.5□□□□□ -1.05
HLA-CQ95604 AC098828.1-201ENST00000436164 440 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-CQ95604 AC243962.1-201ENST00000441512 579 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 RPSAP24-201ENST00000461543 873 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 AC005165.2-201ENST00000466070 380 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 OR52A4P-201ENST00000472867 958 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 AF305872.1-201ENST00000485217 471 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 DUTP7-201ENST00000507982 486 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 AC006070.1-201ENST00000508151 193 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 AC114786.4-201ENST00000508771 728 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC8.5□□□□□ -1.05
HLA-CQ95604 UGT2A3P7-201ENST00000510485 734 ntBASIC8.5□□□□□ -1.05
HLA-CQ95604 IMPA1P1-201ENST00000510718 842 ntBASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms