Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 SPATA31C1-201ENST00000420021 3895 ntBASIC9.7□□□□□ -0.86
VPS8Q8N3P4 EEF1A1P21-201ENST00000512363 1344 ntBASIC9.7□□□□□ -0.86
VPS8Q8N3P4 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 MAPK10-371ENST00000641952 5209 ntBASIC9.7□□□□□ -0.86
VPS8Q8N3P4 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 RN7SKP15-201ENST00000364742 309 ntBASIC9.7□□□□□ -0.86
VPS8Q8N3P4 RPS7P8-201ENST00000418311 581 ntBASIC9.7□□□□□ -0.86
VPS8Q8N3P4 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 ATP6V1E1P1-201ENST00000439215 681 ntBASIC9.7□□□□□ -0.86
VPS8Q8N3P4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 AMYP1-201ENST00000440059 1023 ntBASIC9.7□□□□□ -0.86
VPS8Q8N3P4 AL355355.1-201ENST00000442900 793 ntBASIC9.7□□□□□ -0.86
VPS8Q8N3P4 FTLP8-201ENST00000446770 267 ntBASIC9.7□□□□□ -0.86
VPS8Q8N3P4 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 AC090115.2-201ENST00000548060 883 ntBASIC9.7□□□□□ -0.86
VPS8Q8N3P4 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 NPIPB1P-202ENST00000588786 828 ntBASIC9.7□□□□□ -0.86
VPS8Q8N3P4 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 AC073488.3-201ENST00000631611 778 ntBASIC9.7□□□□□ -0.86
VPS8Q8N3P4 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
VPS8Q8N3P4 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VPS8Q8N3P4 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC9.69□□□□□ -0.86
VPS8Q8N3P4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
VPS8Q8N3P4 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC9.69□□□□□ -0.86
VPS8Q8N3P4 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS8Q8N3P4 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS8Q8N3P4 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC9.69□□□□□ -0.86
VPS8Q8N3P4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC9.69□□□□□ -0.86
VPS8Q8N3P4 AL353662.1-201ENST00000439099 327 ntBASIC9.69□□□□□ -0.86
VPS8Q8N3P4 ZNF619P1-201ENST00000446539 752 ntBASIC9.69□□□□□ -0.86
VPS8Q8N3P4 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC9.69□□□□□ -0.86
VPS8Q8N3P4 AC060775.1-201ENST00000518241 520 ntBASIC9.69□□□□□ -0.86
VPS8Q8N3P4 AP004609.2-201ENST00000532177 190 ntBASIC9.69□□□□□ -0.86
VPS8Q8N3P4 ASB8-203ENST00000535988 679 ntTSL 2 BASIC9.69□□□□□ -0.86
VPS8Q8N3P4 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC9.69□□□□□ -0.86
VPS8Q8N3P4 AC067852.5-201ENST00000589299 310 ntBASIC9.69□□□□□ -0.86
VPS8Q8N3P4 MIR6809-201ENST00000612189 116 ntBASIC9.69□□□□□ -0.86
VPS8Q8N3P4 AL450226.2-201ENST00000622913 439 ntBASIC9.69□□□□□ -0.86
VPS8Q8N3P4 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
VPS8Q8N3P4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC9.69□□□□□ -0.86
VPS8Q8N3P4 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
VPS8Q8N3P4 HSPD1P9-201ENST00000420325 1636 ntBASIC9.69□□□□□ -0.86
VPS8Q8N3P4 AC119674.1-202ENST00000641333 1860 ntBASIC9.69□□□□□ -0.86
VPS8Q8N3P4 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
VPS8Q8N3P4 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC9.69□□□□□ -0.86
VPS8Q8N3P4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 AC024587.1-201ENST00000505925 2157 ntBASIC9.68□□□□□ -0.86
VPS8Q8N3P4 AC022034.1-201ENST00000512867 2156 ntBASIC9.68□□□□□ -0.86
VPS8Q8N3P4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 RNA5SP156-201ENST00000410250 110 ntBASIC9.68□□□□□ -0.86
VPS8Q8N3P4 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 GAPDHP75-201ENST00000433910 943 ntBASIC9.68□□□□□ -0.86
VPS8Q8N3P4 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 AC141002.1-201ENST00000607025 279 ntBASIC9.68□□□□□ -0.86
VPS8Q8N3P4 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC9.68□□□□□ -0.86
VPS8Q8N3P4 AC008957.3-201ENST00000624112 2242 ntBASIC9.67□□□□□ -0.86
VPS8Q8N3P4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 AL353763.1-201ENST00000624467 1628 ntBASIC9.67□□□□□ -0.86
VPS8Q8N3P4 AOX3P-204ENST00000491025 2107 ntBASIC9.67□□□□□ -0.86
VPS8Q8N3P4 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS8Q8N3P4 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms