Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 FUNDC2P3-201ENST00000334716 533 ntBASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 RNA5SP350-201ENST00000363298 111 ntBASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 AC068138.1-201ENST00000412635 217 ntBASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 AL359885.1-201ENST00000415786 903 ntBASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 AL451136.1-201ENST00000435399 325 ntBASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 SNX18P26-201ENST00000458433 740 ntBASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 RN7SL552P-201ENST00000462094 276 ntBASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 MARK2P8-201ENST00000476069 952 ntBASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 RPL12P31-201ENST00000478433 450 ntBASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 OR9A1P-202ENST00000484361 945 ntBASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 RN7SL230P-201ENST00000580835 303 ntBASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 AL359976.1-201ENST00000418655 3528 ntBASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 MIR188-201ENST00000385034 86 ntBASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 RN7SKP86-201ENST00000410454 332 ntBASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 AC094019.1-201ENST00000434678 472 ntBASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 AC010086.1-201ENST00000437359 1052 ntBASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 SOCS5P1-201ENST00000440415 949 ntBASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 OR4D12P-201ENST00000509361 911 ntBASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 AC009120.3-201ENST00000563335 499 ntBASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 OR1E3-201ENST00000575608 948 ntBASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 AC009779.8-202ENST00000607990 932 ntBASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 AL359091.2-201ENST00000609303 556 ntBASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 AC111152.1-202ENST00000635848 339 ntBASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 AL596275.2-207ENST00000641188 675 ntBASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 AKAP17BP-201ENST00000431706 2719 ntBASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 MAPK10-287ENST00000641217 3037 ntBASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
C9orf40Q8IXQ3 AC010168.2-201ENST00000562691 5428 ntBASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
C9orf40Q8IXQ3 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms