Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
LRRTM4Q86VH4 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.52□□□□□ -1.37
LRRTM4Q86VH4 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LRRTM4Q86VH4 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LRRTM4Q86VH4 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LRRTM4Q86VH4 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LRRTM4Q86VH4 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LRRTM4Q86VH4 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
LRRTM4Q86VH4 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.52□□□□□ -1.37
LRRTM4Q86VH4 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
LRRTM4Q86VH4 CDY5P-201ENST00000411487 1580 ntBASIC6.52□□□□□ -1.37
LRRTM4Q86VH4 CDY9P-201ENST00000451397 1580 ntBASIC6.52□□□□□ -1.37
LRRTM4Q86VH4 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
LRRTM4Q86VH4 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LRRTM4Q86VH4 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LRRTM4Q86VH4 CLCA3P-203ENST00000490028 2781 ntBASIC6.52□□□□□ -1.37
LRRTM4Q86VH4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC022417.1-201ENST00000624768 1303 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 NCOA4P3-201ENST00000513203 1877 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 LCOR-201ENST00000286067 4542 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC083806.2-201ENST00000617795 2685 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 CXADRP1-201ENST00000398098 1095 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AL358178.1-201ENST00000407698 397 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AL445528.1-201ENST00000426330 420 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 NPM1P26-201ENST00000426339 738 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 SULT1D1P-201ENST00000458020 882 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC004890.1-201ENST00000461005 181 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 RN7SL413P-201ENST00000482700 297 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC138517.1-201ENST00000515724 568 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AL162632.2-201ENST00000553933 399 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 RNU6-84P-201ENST00000607737 102 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 CXADRP3-202ENST00000617265 1100 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC009032.1-201ENST00000617574 431 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC048341.3-201ENST00000619323 491 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 SMG1P5-202ENST00000529428 4219 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 SMG1P2-201ENST00000566127 4221 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 AC007485.2-201ENST00000623493 1667 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 DDX18P6-201ENST00000450119 1997 ntBASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LRRTM4Q86VH4 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 CASC19-238ENST00000641523 1558 ntBASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LRRTM4Q86VH4 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms