Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC073648.3-201ENST00000504939 925 ntBASIC6.94□□□□□ -1.3
YBX1P67809 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
YBX1P67809 AC017007.1-201ENST00000511960 415 ntBASIC6.94□□□□□ -1.3
YBX1P67809 AC110775.1-201ENST00000513721 462 ntBASIC6.94□□□□□ -1.3
YBX1P67809 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
YBX1P67809 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.94□□□□□ -1.3
YBX1P67809 AC079866.1-201ENST00000534985 1220 ntBASIC6.94□□□□□ -1.3
YBX1P67809 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.94□□□□□ -1.3
YBX1P67809 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.94□□□□□ -1.3
YBX1P67809 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.94□□□□□ -1.3
YBX1P67809 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.94□□□□□ -1.3
YBX1P67809 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.94□□□□□ -1.3
YBX1P67809 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.94□□□□□ -1.3
YBX1P67809 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC6.94□□□□□ -1.3
YBX1P67809 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.94□□□□□ -1.3
YBX1P67809 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.94□□□□□ -1.3
YBX1P67809 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.94□□□□□ -1.3
YBX1P67809 AC099785.1-201ENST00000605697 437 ntBASIC6.94□□□□□ -1.3
YBX1P67809 AC093673.2-201ENST00000609674 331 ntBASIC6.94□□□□□ -1.3
YBX1P67809 AC022106.1-201ENST00000612834 766 ntBASIC6.94□□□□□ -1.3
YBX1P67809 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.94□□□□□ -1.3
YBX1P67809 AC007347.2-201ENST00000623044 180 ntBASIC6.94□□□□□ -1.3
YBX1P67809 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.94□□□□□ -1.3
YBX1P67809 AL359715.5-201ENST00000623431 443 ntBASIC6.94□□□□□ -1.3
YBX1P67809 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
YBX1P67809 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
YBX1P67809 AL391262.1-201ENST00000556558 1992 ntBASIC6.94□□□□□ -1.3
YBX1P67809 AC061975.7-201ENST00000592016 2692 ntBASIC6.94□□□□□ -1.3
YBX1P67809 AC112243.1-201ENST00000623949 3851 ntBASIC6.94□□□□□ -1.3
YBX1P67809 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
YBX1P67809 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
YBX1P67809 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.94□□□□□ -1.3
YBX1P67809 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.94□□□□□ -1.3
YBX1P67809 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
YBX1P67809 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
YBX1P67809 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.94□□□□□ -1.3
YBX1P67809 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
YBX1P67809 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.94□□□□□ -1.3
YBX1P67809 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
YBX1P67809 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
YBX1P67809 MFSD8-256ENST00000641949 1640 ntBASIC6.94□□□□□ -1.3
YBX1P67809 AL008638.3-201ENST00000623027 5182 ntBASIC6.94□□□□□ -1.3
YBX1P67809 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
YBX1P67809 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.93□□□□□ -1.3
YBX1P67809 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
YBX1P67809 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
YBX1P67809 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
YBX1P67809 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.93□□□□□ -1.3
YBX1P67809 AC087392.3-202ENST00000358446 1754 ntBASIC6.93□□□□□ -1.3
YBX1P67809 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.93□□□□□ -1.3
YBX1P67809 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.93□□□□□ -1.3
YBX1P67809 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
YBX1P67809 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.93□□□□□ -1.3
YBX1P67809 Y_RNA.51-201ENST00000362725 102 ntBASIC6.93□□□□□ -1.3
YBX1P67809 RN7SKP107-201ENST00000364157 290 ntBASIC6.93□□□□□ -1.3
YBX1P67809 RNA5SP442-201ENST00000365050 107 ntBASIC6.93□□□□□ -1.3
YBX1P67809 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
YBX1P67809 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
YBX1P67809 HMGB3P19-201ENST00000403971 560 ntBASIC6.93□□□□□ -1.3
YBX1P67809 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.93□□□□□ -1.3
YBX1P67809 SNORA11D-201ENST00000408548 128 ntBASIC6.93□□□□□ -1.3
YBX1P67809 SNORA11E-201ENST00000408778 128 ntBASIC6.93□□□□□ -1.3
YBX1P67809 SNORA79B-201ENST00000410557 148 ntBASIC6.93□□□□□ -1.3
YBX1P67809 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.93□□□□□ -1.3
YBX1P67809 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.93□□□□□ -1.3
YBX1P67809 AC134879.1-201ENST00000426062 394 ntBASIC6.93□□□□□ -1.3
YBX1P67809 RNF19BPX-201ENST00000426224 625 ntBASIC6.93□□□□□ -1.3
YBX1P67809 DLGAP5P1-201ENST00000430307 464 ntBASIC6.93□□□□□ -1.3
YBX1P67809 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.93□□□□□ -1.3
YBX1P67809 NMNAT1P2-201ENST00000435192 860 ntBASIC6.93□□□□□ -1.3
YBX1P67809 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC6.93□□□□□ -1.3
YBX1P67809 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.93□□□□□ -1.3
YBX1P67809 TPTE2P6-202ENST00000445572 1007 ntBASIC6.93□□□□□ -1.3
YBX1P67809 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.93□□□□□ -1.3
YBX1P67809 RPL36AP55-201ENST00000454114 305 ntBASIC6.93□□□□□ -1.3
YBX1P67809 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.93□□□□□ -1.3
YBX1P67809 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.93□□□□□ -1.3
YBX1P67809 NPM1P29-201ENST00000483112 803 ntBASIC6.93□□□□□ -1.3
YBX1P67809 RPL5P11-201ENST00000498068 893 ntBASIC6.93□□□□□ -1.3
YBX1P67809 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.93□□□□□ -1.3
YBX1P67809 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
YBX1P67809 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.93□□□□□ -1.3
YBX1P67809 AC120036.3-201ENST00000517826 292 ntBASIC6.93□□□□□ -1.3
YBX1P67809 AP000926.4-201ENST00000527351 454 ntBASIC6.93□□□□□ -1.3
YBX1P67809 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.93□□□□□ -1.3
YBX1P67809 SLC25A51P2-201ENST00000535708 889 ntBASIC6.93□□□□□ -1.3
YBX1P67809 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.93□□□□□ -1.3
YBX1P67809 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
YBX1P67809 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC6.93□□□□□ -1.3
YBX1P67809 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.93□□□□□ -1.3
YBX1P67809 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.93□□□□□ -1.3
YBX1P67809 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
YBX1P67809 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.93□□□□□ -1.3
YBX1P67809 AC122710.3-201ENST00000606566 541 ntBASIC6.93□□□□□ -1.3
YBX1P67809 AP002360.4-201ENST00000606980 481 ntBASIC6.93□□□□□ -1.3
YBX1P67809 AC239868.4-201ENST00000608318 671 ntBASIC6.93□□□□□ -1.3
YBX1P67809 MIR6883-201ENST00000614952 78 ntBASIC6.93□□□□□ -1.3
YBX1P67809 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.93□□□□□ -1.3
YBX1P67809 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.93□□□□□ -1.3
YBX1P67809 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms