Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC079776.5-201ENST00000641920 211 ntBASIC7.03□□□□□ -1.28
VCPP55072 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VCPP55072 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.03□□□□□ -1.28
VCPP55072 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VCPP55072 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VCPP55072 AC013488.1-201ENST00000526618 1838 ntBASIC7.03□□□□□ -1.28
VCPP55072 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.03□□□□□ -1.28
VCPP55072 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VCPP55072 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VCPP55072 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VCPP55072 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
VCPP55072 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.03□□□□□ -1.28
VCPP55072 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.02□□□□□ -1.28
VCPP55072 AL669831.5-218ENST00000591702 1873 ntBASIC7.02□□□□□ -1.28
VCPP55072 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.02□□□□□ -1.28
VCPP55072 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
VCPP55072 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
VCPP55072 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.02□□□□□ -1.29
VCPP55072 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
VCPP55072 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VCPP55072 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VCPP55072 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VCPP55072 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VCPP55072 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VCPP55072 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
VCPP55072 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
VCPP55072 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.02□□□□□ -1.29
VCPP55072 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VCPP55072 ZNF658B-201ENST00000602828 3408 ntBASIC7.02□□□□□ -1.29
VCPP55072 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
VCPP55072 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
VCPP55072 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.02□□□□□ -1.29
VCPP55072 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
VCPP55072 RNA5SP485-201ENST00000365053 119 ntBASIC7.02□□□□□ -1.29
VCPP55072 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VCPP55072 MIR188-201ENST00000385034 86 ntBASIC7.02□□□□□ -1.29
VCPP55072 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.02□□□□□ -1.29
VCPP55072 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC7.02□□□□□ -1.29
VCPP55072 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.02□□□□□ -1.29
VCPP55072 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.02□□□□□ -1.29
VCPP55072 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VCPP55072 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.02□□□□□ -1.29
VCPP55072 COL11A2P1-205ENST00000441798 676 ntBASIC7.02□□□□□ -1.29
VCPP55072 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.02□□□□□ -1.29
VCPP55072 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.02□□□□□ -1.29
VCPP55072 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VCPP55072 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC7.02□□□□□ -1.29
VCPP55072 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.02□□□□□ -1.29
VCPP55072 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.02□□□□□ -1.29
VCPP55072 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC7.02□□□□□ -1.29
VCPP55072 SNX18P10-201ENST00000625014 519 ntBASIC7.02□□□□□ -1.29
VCPP55072 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VCPP55072 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
VCPP55072 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.02□□□□□ -1.29
VCPP55072 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VCPP55072 RACGAP1P-201ENST00000550663 1879 ntBASIC7.02□□□□□ -1.29
VCPP55072 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VCPP55072 AC020658.2-201ENST00000559030 4020 ntBASIC7.02□□□□□ -1.29
VCPP55072 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
VCPP55072 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
VCPP55072 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VCPP55072 AC025809.2-201ENST00000625085 1802 ntBASIC7.01□□□□□ -1.29
VCPP55072 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VCPP55072 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.01□□□□□ -1.29
VCPP55072 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VCPP55072 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
VCPP55072 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
VCPP55072 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.01□□□□□ -1.29
VCPP55072 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
VCPP55072 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VCPP55072 LCN1P2-201ENST00000372030 223 ntBASIC7.01□□□□□ -1.29
VCPP55072 AC004386.1-201ENST00000393214 761 ntBASIC7.01□□□□□ -1.29
VCPP55072 CYCSP17-201ENST00000407870 315 ntBASIC7.01□□□□□ -1.29
VCPP55072 MRPS21P5-201ENST00000417885 231 ntBASIC7.01□□□□□ -1.29
VCPP55072 AL360013.1-201ENST00000419031 858 ntBASIC7.01□□□□□ -1.29
VCPP55072 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.01□□□□□ -1.29
VCPP55072 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VCPP55072 NPM1P25-201ENST00000429734 854 ntBASIC7.01□□□□□ -1.29
VCPP55072 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.01□□□□□ -1.29
VCPP55072 AC245452.2-201ENST00000435222 392 ntBASIC7.01□□□□□ -1.29
VCPP55072 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.01□□□□□ -1.29
VCPP55072 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.01□□□□□ -1.29
VCPP55072 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.01□□□□□ -1.29
VCPP55072 SULT1D1P-201ENST00000458020 882 ntBASIC7.01□□□□□ -1.29
VCPP55072 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.01□□□□□ -1.29
VCPP55072 MTATP6P1-201ENST00000514057 681 ntBASIC7.01□□□□□ -1.29
VCPP55072 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.01□□□□□ -1.29
VCPP55072 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
VCPP55072 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.01□□□□□ -1.29
VCPP55072 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.01□□□□□ -1.29
VCPP55072 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
VCPP55072 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VCPP55072 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.01□□□□□ -1.29
VCPP55072 AC091167.5-201ENST00000605689 894 ntBASIC7.01□□□□□ -1.29
VCPP55072 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.01□□□□□ -1.29
VCPP55072 AC103703.1-201ENST00000634783 663 ntBASIC7.01□□□□□ -1.29
VCPP55072 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
VCPP55072 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VCPP55072 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VCPP55072 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms