Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.92□□□□□ -1.3
SSR1P43307 PPBPP2-201ENST00000513150 1362 ntBASIC6.92□□□□□ -1.3
SSR1P43307 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSR1P43307 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSR1P43307 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSR1P43307 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.92□□□□□ -1.3
SSR1P43307 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSR1P43307 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSR1P43307 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.91□□□□□ -1.3
SSR1P43307 AC105749.1-201ENST00000631338 2008 ntBASIC6.91□□□□□ -1.3
SSR1P43307 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSR1P43307 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.91□□□□□ -1.3
SSR1P43307 AC011416.1-201ENST00000514947 1732 ntBASIC6.91□□□□□ -1.3
SSR1P43307 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
SSR1P43307 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSR1P43307 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSR1P43307 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSR1P43307 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.91□□□□□ -1.3
SSR1P43307 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.91□□□□□ -1.3
SSR1P43307 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SSR1P43307 LDHAP5-201ENST00000394996 622 ntBASIC6.91□□□□□ -1.3
SSR1P43307 AC092646.1-201ENST00000427142 901 ntBASIC6.91□□□□□ -1.3
SSR1P43307 ETF1P1-206ENST00000427296 984 ntBASIC6.91□□□□□ -1.3
SSR1P43307 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.91□□□□□ -1.3
SSR1P43307 FTLP19-201ENST00000433300 394 ntBASIC6.91□□□□□ -1.3
SSR1P43307 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SSR1P43307 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.91□□□□□ -1.3
SSR1P43307 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SSR1P43307 RPL17P2-201ENST00000491913 451 ntBASIC6.91□□□□□ -1.3
SSR1P43307 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.91□□□□□ -1.3
SSR1P43307 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.91□□□□□ -1.3
SSR1P43307 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.91□□□□□ -1.3
SSR1P43307 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.91□□□□□ -1.3
SSR1P43307 AC007068.2-201ENST00000543168 395 ntBASIC6.91□□□□□ -1.3
SSR1P43307 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.91□□□□□ -1.3
SSR1P43307 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.91□□□□□ -1.3
SSR1P43307 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.91□□□□□ -1.3
SSR1P43307 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.91□□□□□ -1.3
SSR1P43307 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.91□□□□□ -1.3
SSR1P43307 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSR1P43307 AC022613.3-201ENST00000560740 1346 ntBASIC6.91□□□□□ -1.3
SSR1P43307 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSR1P43307 AC068769.1-201ENST00000474767 2426 ntBASIC6.91□□□□□ -1.3
SSR1P43307 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSR1P43307 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SSR1P43307 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.91□□□□□ -1.3
SSR1P43307 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSR1P43307 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.91□□□□□ -1.3
SSR1P43307 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SSR1P43307 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
SSR1P43307 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SSR1P43307 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
SSR1P43307 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.9□□□□□ -1.3
SSR1P43307 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.9□□□□□ -1.3
SSR1P43307 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SSR1P43307 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SSR1P43307 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SSR1P43307 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SSR1P43307 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
SSR1P43307 AL139100.1-201ENST00000408001 498 ntBASIC6.9□□□□□ -1.3
SSR1P43307 OR52N3P-201ENST00000413417 934 ntBASIC6.9□□□□□ -1.3
SSR1P43307 RPL18AP14-201ENST00000417685 526 ntBASIC6.9□□□□□ -1.3
SSR1P43307 AL158214.1-201ENST00000444423 404 ntBASIC6.9□□□□□ -1.3
SSR1P43307 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SSR1P43307 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.9□□□□□ -1.3
SSR1P43307 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SSR1P43307 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.9□□□□□ -1.3
SSR1P43307 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.9□□□□□ -1.3
SSR1P43307 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.9□□□□□ -1.3
SSR1P43307 AC106800.3-201ENST00000511389 308 ntBASIC6.9□□□□□ -1.3
SSR1P43307 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.9□□□□□ -1.3
SSR1P43307 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.9□□□□□ -1.3
SSR1P43307 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.9□□□□□ -1.3
SSR1P43307 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.9□□□□□ -1.3
SSR1P43307 AC089984.3-201ENST00000552838 363 ntBASIC6.9□□□□□ -1.3
SSR1P43307 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.9□□□□□ -1.3
SSR1P43307 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.9□□□□□ -1.3
SSR1P43307 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.9□□□□□ -1.3
SSR1P43307 AC011497.2-201ENST00000600255 639 ntBASIC6.9□□□□□ -1.3
SSR1P43307 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.9□□□□□ -1.3
SSR1P43307 AC002069.2-201ENST00000603580 883 ntBASIC6.9□□□□□ -1.3
SSR1P43307 AC099777.1-201ENST00000603779 1070 ntBASIC6.9□□□□□ -1.3
SSR1P43307 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.9□□□□□ -1.3
SSR1P43307 AP001264.1-201ENST00000620602 703 ntBASIC6.9□□□□□ -1.3
SSR1P43307 AC117503.3-201ENST00000623811 601 ntBASIC6.9□□□□□ -1.3
SSR1P43307 AC005355.2-201ENST00000625064 484 ntBASIC6.9□□□□□ -1.3
SSR1P43307 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.9□□□□□ -1.3
SSR1P43307 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SSR1P43307 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.9□□□□□ -1.3
SSR1P43307 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
SSR1P43307 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SSR1P43307 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SSR1P43307 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.9□□□□□ -1.31
SSR1P43307 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
SSR1P43307 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.9□□□□□ -1.31
SSR1P43307 AP005435.3-201ENST00000531260 3198 ntBASIC6.9□□□□□ -1.31
SSR1P43307 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SSR1P43307 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.89□□□□□ -1.31
SSR1P43307 AC093849.1-201ENST00000563631 2209 ntBASIC6.89□□□□□ -1.31
SSR1P43307 AC005225.5-201ENST00000623547 2225 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms