Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 CYP4F32P-201ENST00000426492 504 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 CDK7P1-201ENST00000434574 693 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 AL445466.1-201ENST00000448432 357 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 MORF4L1P4-201ENST00000450245 976 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 NDUFA5P12-201ENST00000503796 343 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 AC106800.3-201ENST00000511389 308 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.43□□□□□ -1.22
SCN4AP35499 AL136131.3-201ENST00000607600 188 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 AC022106.1-201ENST00000612834 766 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.43□□□□□ -1.22
SCN4AP35499 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCN4AP35499 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC7.43□□□□□ -1.22
SCN4AP35499 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCN4AP35499 AC027088.4-201ENST00000611559 1947 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCN4AP35499 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.43□□□□□ -1.22
SCN4AP35499 WDR95P-201ENST00000425638 1542 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.43□□□□□ -1.22
SCN4AP35499 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.43□□□□□ -1.22
SCN4AP35499 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.43□□□□□ -1.22
SCN4AP35499 AC235565.1-201ENST00000456962 1325 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 AC012254.3-201ENST00000591183 2117 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.43□□□□□ -1.22
SCN4AP35499 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCN4AP35499 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.43□□□□□ -1.22
SCN4AP35499 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCN4AP35499 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.43□□□□□ -1.22
SCN4AP35499 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCN4AP35499 AC245096.1-201ENST00000413104 546 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 RPL35AP3-201ENST00000414680 288 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.43□□□□□ -1.22
SCN4AP35499 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.43□□□□□ -1.22
SCN4AP35499 RN7SL329P-201ENST00000467740 299 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 BX510359.5-201ENST00000515651 304 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 Y_RNA.710-201ENST00000516975 110 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.43□□□□□ -1.22
SCN4AP35499 EIF4A2P5-201ENST00000529914 499 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCN4AP35499 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
SCN4AP35499 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.43□□□□□ -1.22
SCN4AP35499 AC034229.6-201ENST00000623704 224 ntBASIC7.43□□□□□ -1.22
SCN4AP35499 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.43□□□□□ -1.22
SCN4AP35499 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.43□□□□□ -1.22
SCN4AP35499 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCN4AP35499 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.43□□□□□ -1.22
SCN4AP35499 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
SCN4AP35499 GNL2P1-201ENST00000451274 2190 ntBASIC7.42□□□□□ -1.22
SCN4AP35499 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SCN4AP35499 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.42□□□□□ -1.22
SCN4AP35499 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCN4AP35499 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SCN4AP35499 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCN4AP35499 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SCN4AP35499 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.42□□□□□ -1.22
SCN4AP35499 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC7.42□□□□□ -1.22
SCN4AP35499 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7.42□□□□□ -1.22
SCN4AP35499 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.42□□□□□ -1.22
SCN4AP35499 CCNT2P1-201ENST00000423082 1315 ntBASIC7.42□□□□□ -1.22
SCN4AP35499 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SCN4AP35499 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCN4AP35499 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCN4AP35499 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
SCN4AP35499 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SCN4AP35499 AC105342.1-201ENST00000378334 6848 ntBASIC7.42□□□□□ -1.22
SCN4AP35499 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCN4AP35499 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCN4AP35499 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SCN4AP35499 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SCN4AP35499 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.42□□□□□ -1.22
SCN4AP35499 OR2AT2P-201ENST00000413438 905 ntBASIC7.42□□□□□ -1.22
SCN4AP35499 AC096537.2-201ENST00000413707 714 ntBASIC7.42□□□□□ -1.22
SCN4AP35499 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.42□□□□□ -1.22
SCN4AP35499 PSMC1P2-201ENST00000423961 1204 ntBASIC7.42□□□□□ -1.22
SCN4AP35499 AC007386.1-201ENST00000455212 582 ntBASIC7.42□□□□□ -1.22
SCN4AP35499 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.42□□□□□ -1.22
SCN4AP35499 RANP2-201ENST00000456833 229 ntBASIC7.42□□□□□ -1.22
SCN4AP35499 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC7.42□□□□□ -1.22
SCN4AP35499 IGHV3-57-201ENST00000520143 280 ntBASIC7.42□□□□□ -1.22
SCN4AP35499 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.42□□□□□ -1.22
SCN4AP35499 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.42□□□□□ -1.22
SCN4AP35499 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.42□□□□□ -1.22
SCN4AP35499 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.42□□□□□ -1.22
SCN4AP35499 OR7A1P-201ENST00000601206 970 ntBASIC7.42□□□□□ -1.22
SCN4AP35499 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCN4AP35499 AL445670.1-201ENST00000618889 801 ntBASIC7.42□□□□□ -1.22
SCN4AP35499 OR1N1-202ENST00000619659 939 ntBASIC7.42□□□□□ -1.22
SCN4AP35499 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.42□□□□□ -1.22
SCN4AP35499 AC027348.2-201ENST00000624375 642 ntBASIC7.42□□□□□ -1.22
SCN4AP35499 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.42□□□□□ -1.22
SCN4AP35499 AC005839.1-201ENST00000624148 3213 ntBASIC7.42□□□□□ -1.22
SCN4AP35499 CASC19-228ENST00000641414 1684 ntBASIC7.42□□□□□ -1.22
SCN4AP35499 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.42□□□□□ -1.22
SCN4AP35499 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCN4AP35499 AC104964.2-201ENST00000562242 4641 ntBASIC7.42□□□□□ -1.22
SCN4AP35499 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SCN4AP35499 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SCN4AP35499 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.41□□□□□ -1.22
SCN4AP35499 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SCN4AP35499 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCN4AP35499 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms