Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGA1P17096 AC011416.1-201ENST00000514947 1732 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGA1P17096 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGA1P17096 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
HMGA1P17096 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HMGA1P17096 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
HMGA1P17096 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGA1P17096 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
HMGA1P17096 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGA1P17096 RNA5SP478-201ENST00000364657 115 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 RN7SKP269-201ENST00000365545 319 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 RNA5SP122-201ENST00000384457 108 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.51□□□□□ -1.37
HMGA1P17096 AL445238.1-204ENST00000400311 463 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 AC092967.1-201ENST00000449016 481 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 AL359839.1-201ENST00000451975 1160 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 VPS25P1-201ENST00000455691 508 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 RANP2-201ENST00000456833 229 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 AC098847.1-201ENST00000473094 348 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.51□□□□□ -1.37
HMGA1P17096 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.51□□□□□ -1.37
HMGA1P17096 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.51□□□□□ -1.37
HMGA1P17096 PRMT5P1-201ENST00000514351 598 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 RN7SKP238-201ENST00000516483 249 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 IGKV2-4-201ENST00000523070 340 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.51□□□□□ -1.37
HMGA1P17096 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.51□□□□□ -1.37
HMGA1P17096 AC233702.7-202ENST00000582941 211 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 AL096712.1-201ENST00000614561 159 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 AL445649.1-201ENST00000615941 691 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGA1P17096 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGA1P17096 FO681491.1-202ENST00000623392 737 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGA1P17096 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
HMGA1P17096 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HMGA1P17096 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGA1P17096 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HMGA1P17096 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
HMGA1P17096 AL157831.2-201ENST00000564681 3095 ntBASIC6.51□□□□□ -1.37
HMGA1P17096 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
HMGA1P17096 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HMGA1P17096 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGA1P17096 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGA1P17096 AC008627.1-201ENST00000517511 1704 ntBASIC6.5□□□□□ -1.37
HMGA1P17096 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGA1P17096 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGA1P17096 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.5□□□□□ -1.37
HMGA1P17096 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGA1P17096 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGA1P17096 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
HMGA1P17096 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGA1P17096 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGA1P17096 AC084782.1-201ENST00000564401 2465 ntBASIC6.5□□□□□ -1.37
HMGA1P17096 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGA1P17096 OR11H13P-201ENST00000359695 979 ntBASIC6.5□□□□□ -1.37
HMGA1P17096 RNU1-134P-201ENST00000362935 165 ntBASIC6.5□□□□□ -1.37
HMGA1P17096 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGA1P17096 RPS29P14-201ENST00000431518 171 ntBASIC6.5□□□□□ -1.37
HMGA1P17096 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGA1P17096 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGA1P17096 CST12P-201ENST00000457644 362 ntBASIC6.5□□□□□ -1.37
HMGA1P17096 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGA1P17096 AC026254.2-201ENST00000475295 371 ntBASIC6.5□□□□□ -1.37
HMGA1P17096 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGA1P17096 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.5□□□□□ -1.37
HMGA1P17096 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGA1P17096 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGA1P17096 AC021269.1-201ENST00000526860 705 ntBASIC6.5□□□□□ -1.37
HMGA1P17096 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.5□□□□□ -1.37
HMGA1P17096 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGA1P17096 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGA1P17096 AC027229.1-201ENST00000583887 253 ntBASIC6.5□□□□□ -1.37
HMGA1P17096 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGA1P17096 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGA1P17096 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGA1P17096 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
HMGA1P17096 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.5□□□□□ -1.37
HMGA1P17096 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGA1P17096 AC073488.3-201ENST00000631611 778 ntBASIC6.5□□□□□ -1.37
HMGA1P17096 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
HMGA1P17096 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
HMGA1P17096 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
HMGA1P17096 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGA1P17096 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGA1P17096 AC007406.5-201ENST00000570140 3170 ntBASIC6.5□□□□□ -1.37
HMGA1P17096 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGA1P17096 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGA1P17096 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGA1P17096 AC022325.1-201ENST00000502748 2199 ntBASIC6.5□□□□□ -1.37
HMGA1P17096 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGA1P17096 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGA1P17096 AL359922.2-201ENST00000581788 3017 ntBASIC6.5□□□□□ -1.37
HMGA1P17096 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
HMGA1P17096 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGA1P17096 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGA1P17096 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGA1P17096 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms