Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC063977.7-201ENST00000594454 337 ntBASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 AL157899.1-201ENST00000604110 936 ntBASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 MIR6754-201ENST00000621121 66 ntBASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 SAGE3P-201ENST00000619800 1635 ntBASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 AC092724.1-201ENST00000624623 3397 ntBASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P1B2RPK0 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AC110792.3-201ENST00000595906 1614 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 RNU6-819P-201ENST00000364116 107 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 HMGB1P39-201ENST00000366304 880 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 SNORD15A-201ENST00000384214 148 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 RPL23AP17-201ENST00000401064 499 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 CYCSP17-201ENST00000407870 315 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 VN1R33P-201ENST00000411800 887 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 CYCSP52-201ENST00000422857 310 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AL645936.2-201ENST00000430565 928 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 RPL21P33-201ENST00000444831 484 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 RN7SL587P-201ENST00000459853 281 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 RN7SL520P-201ENST00000474110 286 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AC107029.1-201ENST00000484675 465 ntTSL 2 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 IGHV3-63-201ENST00000518422 341 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 OR8X1P-201ENST00000534542 869 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 RN7SL270P-201ENST00000579643 281 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AC090699.1-201ENST00000586264 321 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AC011921.2-201ENST00000589465 152 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AC010487.1-201ENST00000594408 1172 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 OR7E94P-202ENST00000601375 790 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AC019322.2-201ENST00000605634 147 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AL121950.1-201ENST00000624993 2077 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 NEK2P2-201ENST00000438441 1338 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.73□□□□□ -1.33
HMGB1P1B2RPK0 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 SHQ1P1-201ENST00000437111 1544 ntBASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms