Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 AC005726.4-201ENST00000582858 458 ntBASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 SMIM12P1-201ENST00000603004 274 ntBASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 AC093635.1-201ENST00000609028 555 ntBASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 AC006249.1-201ENST00000621223 471 ntBASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 FO681491.1-202ENST00000623392 737 ntBASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.4□□□□□ -1.39
CCDC187A0A096LP49 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC187A0A096LP49 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC187A0A096LP49 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC187A0A096LP49 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC187A0A096LP49 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.39
CCDC187A0A096LP49 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.4□□□□□ -1.39
CCDC187A0A096LP49 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.39
CCDC187A0A096LP49 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.4□□□□□ -1.39
CCDC187A0A096LP49 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.4□□□□□ -1.39
CCDC187A0A096LP49 AC068446.1-201ENST00000556425 1549 ntBASIC6.4□□□□□ -1.39
CCDC187A0A096LP49 AC020658.2-201ENST00000559030 4020 ntBASIC6.4□□□□□ -1.39
CCDC187A0A096LP49 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.4□□□□□ -1.39
CCDC187A0A096LP49 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC187A0A096LP49 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
CCDC187A0A096LP49 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AC005614.1-201ENST00000598952 3653 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 RNA5SP77-201ENST00000365394 120 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 RNU1-55P-201ENST00000365510 158 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 RPL5P5-201ENST00000392009 893 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 YWHAZP6-201ENST00000399764 738 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 RNA5SP198-201ENST00000410376 127 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AL445528.1-201ENST00000426330 420 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 RPL5P34-201ENST00000426545 891 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 EIF5AP4-201ENST00000441206 465 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 HMGN1P2-201ENST00000445197 310 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 RPL5P9-201ENST00000448118 886 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 OR13C1P-201ENST00000457612 963 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AC135721.2-201ENST00000464237 300 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AC055733.3-201ENST00000505214 523 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 RNU6-1334P-201ENST00000516032 105 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 RPL3P13-201ENST00000550415 216 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 DPPA3P2-202ENST00000557188 1219 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 MIR4502-201ENST00000580432 81 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AC098483.2-201ENST00000603158 454 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 SNORD96A-201ENST00000606577 79 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AC015982.1-201ENST00000608113 465 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AC026951.2-201ENST00000613847 241 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AC022400.9-201ENST00000623633 273 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AL596275.2-203ENST00000641951 371 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AC092725.2-201ENST00000567658 1389 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 CDY7P-201ENST00000429883 1604 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 CUBNP3-201ENST00000457461 1784 ntBASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms