Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AP002004.1-206ENST00000532441 876 ntBASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AC089984.3-201ENST00000552838 363 ntBASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AL162632.2-201ENST00000553933 399 ntBASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AP001264.1-201ENST00000620602 703 ntBASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AC007204.1-201ENST00000621794 555 ntBASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 AC073488.9-201ENST00000631601 754 ntBASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RHBDD3Q9Y3P4 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 PSMC1P4-201ENST00000515236 1327 ntBASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RHBDD3Q9Y3P4 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC073365.1-203ENST00000641055 1992 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC011455.2-201ENST00000599320 3336 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 RN7SKP161-201ENST00000411110 305 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 OR52N3P-201ENST00000413417 934 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 MEAF6P1-201ENST00000416092 327 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AL929472.1-201ENST00000417484 429 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AL596268.1-201ENST00000427910 1048 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 E2F6P1-201ENST00000428850 745 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 E2F6P3-201ENST00000441743 743 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 GAPDHP33-201ENST00000443168 1013 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 RN7SKP198-201ENST00000459286 306 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC135999.1-201ENST00000478962 479 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC022415.1-202ENST00000486612 523 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 RN7SL37P-201ENST00000490461 307 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC008429.2-201ENST00000523057 864 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 SLC25A51P2-201ENST00000535708 889 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC023080.1-201ENST00000551663 931 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC116165.3-201ENST00000614524 400 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC005514.1-201ENST00000623521 208 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 AC010132.4-201ENST00000569883 1368 ntBASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.64□□□□□ -1.51
RHBDD3Q9Y3P4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AL353763.1-201ENST00000624467 1628 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 419.5 ms