Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC011497.2-201ENST00000600255 639 ntBASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 MIR6085-201ENST00000618314 110 ntBASIC7.65□□□□□ -1.18
CLIP2Q9UDT6 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.65□□□□□ -1.19
CLIP2Q9UDT6 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.19
CLIP2Q9UDT6 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
CLIP2Q9UDT6 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
CLIP2Q9UDT6 AC034229.2-201ENST00000566945 2508 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 AC010168.2-201ENST00000562691 5428 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 MIR1275-201ENST00000408770 80 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 AC096537.2-201ENST00000413707 714 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 AC118758.1-202ENST00000454719 225 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 AC107958.1-201ENST00000556576 290 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 MIR3154-201ENST00000577829 84 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 OR7A11P-201ENST00000597719 953 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 BUB1P1-201ENST00000603541 607 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 MIR7109-201ENST00000613748 65 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 AC005393.1-201ENST00000617916 584 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 AP001264.1-201ENST00000620602 703 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 AC111152.1-202ENST00000635848 339 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 LINC02495-203ENST00000636704 242 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 AL033543.1-201ENST00000623440 13454 ntBASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP2Q9UDT6 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 SNORD35A-201ENST00000363389 86 ntBASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 RNA5SP279-201ENST00000365513 117 ntBASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 CXADRP1-201ENST00000398098 1095 ntBASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 AC131392.1-201ENST00000506490 633 ntBASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 RNA5SP418-201ENST00000515951 117 ntBASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 AC026898.1-201ENST00000586404 571 ntBASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 AL157899.1-201ENST00000604110 936 ntBASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 MIR6721-201ENST00000617181 87 ntBASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 CXADRP3-202ENST00000617265 1100 ntBASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 AL591926.1-201ENST00000620542 217 ntBASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 CASC19-228ENST00000641414 1684 ntBASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CLIP2Q9UDT6 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP2Q9UDT6 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 766.8 ms