Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 MIR744-201ENST00000578242 98 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AC114477.1-201ENST00000605097 605 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AC005899.6-201ENST00000620729 297 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 MIR6503-201ENST00000622884 86 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AL353763.1-201ENST00000624467 1628 ntBASIC6.63□□□□□ -1.35
PCDH9Q9HC56 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
PCDH9Q9HC56 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 SAGE3P-201ENST00000619800 1635 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 BIN2P1-201ENST00000504996 1530 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AC007114.2-201ENST00000576014 4281 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 HMGA1P8-201ENST00000414130 321 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 MRPS21P5-201ENST00000417885 231 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 TPTE2P1-204ENST00000435256 593 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AL022237.1-201ENST00000446663 358 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 MTND4LP12-201ENST00000448237 295 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 RPL19P11-201ENST00000495944 589 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AC022206.1-201ENST00000495947 347 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AC114324.2-202ENST00000503812 134 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 RN7SKP248-201ENST00000516278 305 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AC022784.5-201ENST00000522241 437 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 SETP3-201ENST00000581726 813 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AL390877.1-201ENST00000605704 214 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 U1.41-201ENST00000617626 165 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 AC010401.2-201ENST00000575137 4934 ntBASIC6.62□□□□□ -1.35
PCDH9Q9HC56 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
PCDH9Q9HC56 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 MAPK10-287ENST00000641217 3037 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 MRPS6P2-201ENST00000381143 370 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 AL360271.1-201ENST00000395679 510 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 AL033519.1-201ENST00000407266 307 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 UBE2V1P14-201ENST00000415815 558 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 NPM1P23-201ENST00000440193 849 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 COL11A2P1-205ENST00000441798 676 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 PA2G4P1-201ENST00000442248 1197 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 RNU6-775P-201ENST00000459318 96 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.61□□□□□ -1.35
PCDH9Q9HC56 MARK2P8-201ENST00000476069 952 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 AC093870.1-201ENST00000506837 213 ntBASIC6.61□□□□□ -1.35
PCDH9Q9HC56 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms