Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC020661.2-201ENST00000560114 134 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 OR7E19P-202ENST00000589942 844 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 AC008385.1-201ENST00000604421 355 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 AC124303.1-201ENST00000605703 360 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 U1.40-201ENST00000610976 164 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 AL592295.2-201ENST00000612578 206 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 U1.27-201ENST00000615842 164 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 POU6F2-207ENST00000518318 5925 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 AC092279.2-201ENST00000623742 2189 ntBASIC8.97□□□□□ -0.97
LRCH3Q96II8 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 MCM8-203ENST00000378886 3835 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LRCH3Q96II8 HHAT-204ENST00000413764 3575 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC8.97□□□□□ -0.97
LRCH3Q96II8 AC135731.2-201ENST00000603029 2098 ntBASIC8.96□□□□□ -0.97
LRCH3Q96II8 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.97
LRCH3Q96II8 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LRCH3Q96II8 AC023790.2-201ENST00000543321 2403 ntTSL 5 BASIC8.96□□□□□ -0.97
LRCH3Q96II8 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
LRCH3Q96II8 CELF2-212ENST00000632728 3827 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.97
LRCH3Q96II8 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LRCH3Q96II8 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
LRCH3Q96II8 ATF7IP-221ENST00000543189 4887 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
LRCH3Q96II8 SLC9A6-209ENST00000636347 4867 ntTSL 5 BASIC8.96□□□□□ -0.97
LRCH3Q96II8 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC8.96□□□□□ -0.97
LRCH3Q96II8 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
LRCH3Q96II8 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
LRCH3Q96II8 OR4K15-201ENST00000305051 1216 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 OR8B4-201ENST00000356130 990 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 RN7SKP269-201ENST00000365545 319 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LRCH3Q96II8 RPL5P35-201ENST00000398869 816 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AL603908.1-201ENST00000406098 201 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 HMGB3P23-201ENST00000414981 585 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC009237.2-201ENST00000421358 284 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 MTCO1P20-201ENST00000425366 358 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC005189.1-201ENST00000431286 310 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LRCH3Q96II8 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC244505.5-201ENST00000443639 207 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 TCEAL4P1-201ENST00000453620 588 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AL583843.1-201ENST00000456070 346 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 MTND1P16-201ENST00000465177 898 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC098583.2-201ENST00000504151 372 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 ATP1B1P1-201ENST00000509767 915 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC009646.1-201ENST00000510455 318 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC079395.1-201ENST00000510981 262 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC026700.1-201ENST00000512074 544 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 RNU6-123P-201ENST00000516163 102 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 MINCR-206ENST00000524335 499 ntTSL 2 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LRCH3Q96II8 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LRCH3Q96II8 CR383656.6-201ENST00000550518 394 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC078814.3-201ENST00000553036 491 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 HMGB1P33-201ENST00000563485 527 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC093826.2-201ENST00000579042 108 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 CASC15-205ENST00000606336 1288 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LRCH3Q96II8 AL133255.1-201ENST00000606374 441 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AL590282.1-201ENST00000610379 1136 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC016876.3-201ENST00000610459 426 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 MIR6745-201ENST00000612694 127 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC131159.2-201ENST00000613236 702 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 AL132822.1-201ENST00000617063 513 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 7SK.10-201ENST00000621414 298 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC000036.1-201ENST00000449652 2030 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LRCH3Q96II8 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LRCH3Q96II8 MAPT-AS1-204ENST00000634876 3602 ntTSL 5 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 MTND5P16-201ENST00000460269 1703 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 AC126474.2-201ENST00000623268 1750 ntBASIC8.96□□□□□ -0.98
LRCH3Q96II8 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms