Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 AC097721.1-201ENST00000427150 1253 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 CLNS1AP1-201ENST00000435954 682 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 CXCR2P1-202ENST00000443392 1074 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 AC007383.1-201ENST00000445875 636 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 VN1R38P-201ENST00000450265 887 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 RN7SL643P-201ENST00000471845 291 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 RN7SL369P-201ENST00000477138 299 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 RN7SL714P-201ENST00000487050 298 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 RN7SKP183-201ENST00000517169 324 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 IGHV4-55-201ENST00000520889 368 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 AC073916.1-201ENST00000545095 130 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 AC005632.2-201ENST00000564271 828 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 AL352984.2-201ENST00000611153 546 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 MIR6811-201ENST00000620409 58 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 OR7E91P-202ENST00000642062 1198 ntBASIC5.9□□□□□ -1.46
C9orf40Q8IXQ3 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
C9orf40Q8IXQ3 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.9□□□□□ -1.47
C9orf40Q8IXQ3 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
C9orf40Q8IXQ3 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.9□□□□□ -1.47
C9orf40Q8IXQ3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
C9orf40Q8IXQ3 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.9□□□□□ -1.47
C9orf40Q8IXQ3 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
C9orf40Q8IXQ3 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
C9orf40Q8IXQ3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
C9orf40Q8IXQ3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
C9orf40Q8IXQ3 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
C9orf40Q8IXQ3 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
C9orf40Q8IXQ3 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
C9orf40Q8IXQ3 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AL162456.1-201ENST00000634535 2006 ntBASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AP000641.1-201ENST00000531988 1639 ntBASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AL355377.1-201ENST00000621125 1653 ntBASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AL139158.1-201ENST00000424719 340 ntBASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AC112492.2-201ENST00000432774 1030 ntBASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AC005017.1-201ENST00000482002 490 ntBASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 RPS27P20-201ENST00000492051 246 ntBASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AC233702.7-202ENST00000582941 211 ntBASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AC005332.4-201ENST00000592752 579 ntBASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 MIR6780B-201ENST00000610307 79 ntBASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 PPBPP2-201ENST00000513150 1362 ntBASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AC105749.1-201ENST00000631338 2008 ntBASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 AL391261.1-201ENST00000555712 1479 ntBASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.89□□□□□ -1.47
C9orf40Q8IXQ3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
C9orf40Q8IXQ3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms