Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC5.86□□□□□ -1.47
C11orf88Q6PI97 AL358913.1-201ENST00000554342 121 ntBASIC5.86□□□□□ -1.47
C11orf88Q6PI97 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.86□□□□□ -1.47
C11orf88Q6PI97 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.86□□□□□ -1.47
C11orf88Q6PI97 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC5.86□□□□□ -1.47
C11orf88Q6PI97 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC5.86□□□□□ -1.47
C11orf88Q6PI97 AL121985.3-201ENST00000620690 523 ntBASIC5.86□□□□□ -1.47
C11orf88Q6PI97 AC015722.2-201ENST00000622210 551 ntBASIC5.86□□□□□ -1.47
C11orf88Q6PI97 uc_338.21-201ENST00000622458 147 ntBASIC5.86□□□□□ -1.47
C11orf88Q6PI97 SNX18P10-201ENST00000625014 519 ntBASIC5.86□□□□□ -1.47
C11orf88Q6PI97 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC5.86□□□□□ -1.47
C11orf88Q6PI97 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.86□□□□□ -1.47
C11orf88Q6PI97 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC5.86□□□□□ -1.47
C11orf88Q6PI97 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC5.86□□□□□ -1.47
C11orf88Q6PI97 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
C11orf88Q6PI97 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
C11orf88Q6PI97 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.86□□□□□ -1.47
C11orf88Q6PI97 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
C11orf88Q6PI97 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
C11orf88Q6PI97 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
C11orf88Q6PI97 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC119674.1-202ENST00000641333 1860 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC006511.3-201ENST00000624929 1783 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 RNA5SP35-201ENST00000391257 129 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 RPL9P21-201ENST00000392269 505 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 MTND1P10-201ENST00000426108 832 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC019080.2-201ENST00000453859 394 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC126615.1-201ENST00000470084 630 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 RN7SL776P-201ENST00000493390 268 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 OR4A21P-201ENST00000532759 944 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 PDCL3P1-201ENST00000534575 734 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC100832.2-201ENST00000582080 776 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AL591222.2-201ENST00000604443 754 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC012510.1-201ENST00000607946 759 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC245407.2-201ENST00000614199 451 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC009283.1-201ENST00000615852 645 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AL590410.1-201ENST00000617925 333 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC074140.1-201ENST00000621617 208 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC004836.1-201ENST00000623032 634 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC091059.2-201ENST00000623355 614 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC012254.5-201ENST00000623573 478 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AC009120.2-204ENST00000621548 2032 ntBASIC5.85□□□□□ -1.47
C11orf88Q6PI97 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
C11orf88Q6PI97 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
C11orf88Q6PI97 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC5.84□□□□□ -1.47
C11orf88Q6PI97 TPTE2P2-201ENST00000403471 1466 ntBASIC5.84□□□□□ -1.47
C11orf88Q6PI97 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.84□□□□□ -1.47
C11orf88Q6PI97 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
C11orf88Q6PI97 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
C11orf88Q6PI97 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
C11orf88Q6PI97 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
C11orf88Q6PI97 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.84□□□□□ -1.47
C11orf88Q6PI97 AC125232.1-201ENST00000452554 1408 ntBASIC5.84□□□□□ -1.47
C11orf88Q6PI97 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
C11orf88Q6PI97 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
C11orf88Q6PI97 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
C11orf88Q6PI97 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
C11orf88Q6PI97 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC5.84□□□□□ -1.47
C11orf88Q6PI97 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
C11orf88Q6PI97 MIR365B-201ENST00000362317 111 ntBASIC5.84□□□□□ -1.47
C11orf88Q6PI97 RNA5SP65-201ENST00000363166 119 ntBASIC5.84□□□□□ -1.47
C11orf88Q6PI97 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.84□□□□□ -1.47
C11orf88Q6PI97 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
C11orf88Q6PI97 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
C11orf88Q6PI97 RPS3AP5-201ENST00000389400 821 ntBASIC5.84□□□□□ -1.47
C11orf88Q6PI97 MRPL32P1-201ENST00000406301 247 ntBASIC5.84□□□□□ -1.47
C11orf88Q6PI97 OR2W4P-201ENST00000406496 926 ntBASIC5.84□□□□□ -1.47
C11orf88Q6PI97 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC5.84□□□□□ -1.47
C11orf88Q6PI97 AC245884.2-201ENST00000426257 404 ntBASIC5.84□□□□□ -1.47
C11orf88Q6PI97 SNX19-202ENST00000426933 888 ntTSL 2 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms