Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AL049697.3-201ENST00000406493 982 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 Z82198.3-201ENST00000421145 199 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXG1P55316 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXG1P55316 HMGB1P32-201ENST00000425971 565 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 AC092447.3-201ENST00000426027 686 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 OR6R1P-201ENST00000431838 940 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 ARMC4P1-201ENST00000438905 707 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXG1P55316 RBMY2AP-201ENST00000445405 1157 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 LAPTM4BP1-201ENST00000447781 690 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXG1P55316 RBMY2CP-201ENST00000448575 1157 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 RBMY2DP-202ENST00000448881 1157 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXG1P55316 AC099670.1-201ENST00000455141 783 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXG1P55316 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXG1P55316 RPL5P12-201ENST00000477071 851 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 AP000926.3-201ENST00000497201 299 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 AC106806.2-201ENST00000509365 500 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.79□□□□□ -1.48
FOXG1P55316 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXG1P55316 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXG1P55316 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXG1P55316 AC008429.2-201ENST00000523057 864 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXG1P55316 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
FOXG1P55316 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXG1P55316 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXG1P55316 FCF1-203ENST00000553615 954 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXG1P55316 MTND3P12-201ENST00000559068 328 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 AC092718.4-201ENST00000566639 716 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXG1P55316 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXG1P55316 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.79□□□□□ -1.48
FOXG1P55316 AL356986.1-201ENST00000604085 341 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 AC013244.3-201ENST00000605614 388 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 AC244100.4-201ENST00000617747 388 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXG1P55316 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXG1P55316 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXG1P55316 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
FOXG1P55316 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXG1P55316 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.79□□□□□ -1.48
FOXG1P55316 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
FOXG1P55316 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXG1P55316 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXG1P55316 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
FOXG1P55316 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXG1P55316 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
FOXG1P55316 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
FOXG1P55316 AC009831.5-201ENST00000624000 3189 ntBASIC5.79□□□□□ -1.48
FOXG1P55316 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
FOXG1P55316 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FOXG1P55316 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
FOXG1P55316 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.79□□□□□ -1.48
FOXG1P55316 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXG1P55316 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
FOXG1P55316 AC092821.3-202ENST00000641304 2767 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
FOXG1P55316 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.78□□□□□ -1.48
FOXG1P55316 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXG1P55316 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.78□□□□□ -1.48
FOXG1P55316 AC217777.1-201ENST00000570034 1471 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
FOXG1P55316 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.78□□□□□ -1.48
FOXG1P55316 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.78□□□□□ -1.48
FOXG1P55316 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXG1P55316 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXG1P55316 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXG1P55316 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXG1P55316 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
FOXG1P55316 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXG1P55316 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXG1P55316 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.78□□□□□ -1.48
FOXG1P55316 MIR640-201ENST00000385086 96 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
FOXG1P55316 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
FOXG1P55316 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXG1P55316 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.78□□□□□ -1.48
FOXG1P55316 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.78□□□□□ -1.48
FOXG1P55316 AL929472.1-201ENST00000417484 429 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 AC009500.1-201ENST00000420684 583 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 RPL7AP51-201ENST00000422016 760 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.78□□□□□ -1.48
FOXG1P55316 AL020997.1-201ENST00000446554 349 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 GAPDHP16-201ENST00000448152 962 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 TVP23CP1-201ENST00000450317 639 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 LPAL2-203ENST00000454031 2498 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.78□□□□□ -1.48
FOXG1P55316 RBMY2HP-201ENST00000457961 720 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 AC004890.1-201ENST00000461005 181 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.78□□□□□ -1.48
FOXG1P55316 AC044810.1-201ENST00000480271 711 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 RN7SL705P-201ENST00000481678 294 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 RN7SL413P-201ENST00000482700 297 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 AC117395.1-201ENST00000487390 403 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 KCNMB3P1-202ENST00000493696 3389 ntBASIC5.78□□□□□ -1.48
FOXG1P55316 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms