Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HNF4AP41235 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.37□□□□□ -1.39
HNF4AP41235 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HNF4AP41235 DOCK11P1-201ENST00000553480 5932 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HNF4AP41235 AC011503.2-201ENST00000594230 1500 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HNF4AP41235 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.37□□□□□ -1.39
HNF4AP41235 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HNF4AP41235 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.37□□□□□ -1.39
HNF4AP41235 RNA5SP350-201ENST00000363298 111 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HNF4AP41235 AL050335.1-201ENST00000396909 869 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 AL590635.1-201ENST00000406314 586 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 AL023284.3-201ENST00000407767 334 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HNF4AP41235 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.37□□□□□ -1.39
HNF4AP41235 AL356968.2-201ENST00000412769 1257 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 AL359092.1-201ENST00000417156 265 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.37□□□□□ -1.39
HNF4AP41235 CYCSP52-201ENST00000422857 310 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 AL596268.1-201ENST00000427910 1048 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 E2F6P1-201ENST00000428850 745 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 AL451136.1-201ENST00000435399 325 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.37□□□□□ -1.39
HNF4AP41235 E2F6P3-201ENST00000441743 743 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.37□□□□□ -1.39
HNF4AP41235 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.37□□□□□ -1.39
HNF4AP41235 AL121578.2-201ENST00000448797 447 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 OR52Y1P-201ENST00000452418 828 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 RN7SL790P-201ENST00000474043 298 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.37□□□□□ -1.39
HNF4AP41235 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HNF4AP41235 SUMO2P19-201ENST00000518920 295 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.37□□□□□ -1.39
HNF4AP41235 AC131935.1-201ENST00000524621 333 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.37□□□□□ -1.39
HNF4AP41235 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.37□□□□□ -1.39
HNF4AP41235 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.37□□□□□ -1.39
HNF4AP41235 MTND2P17-201ENST00000550281 688 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.37□□□□□ -1.39
HNF4AP41235 HMGN1P26-201ENST00000558737 303 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.37□□□□□ -1.39
HNF4AP41235 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.37□□□□□ -1.39
HNF4AP41235 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.37□□□□□ -1.39
HNF4AP41235 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.37□□□□□ -1.39
HNF4AP41235 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.37□□□□□ -1.39
HNF4AP41235 AC137695.1-201ENST00000604126 489 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.37□□□□□ -1.39
HNF4AP41235 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.37□□□□□ -1.39
HNF4AP41235 AC093635.1-201ENST00000609028 555 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 U1.34-201ENST00000618578 162 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 AC018692.2-201ENST00000624130 348 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.37□□□□□ -1.39
HNF4AP41235 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.37□□□□□ -1.39
HNF4AP41235 AC135068.11-201ENST00000636378 921 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.37□□□□□ -1.39
HNF4AP41235 AC005618.1-201ENST00000606901 3148 ntBASIC6.37□□□□□ -1.39
HNF4AP41235 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HNF4AP41235 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
HNF4AP41235 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HNF4AP41235 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.37□□□□□ -1.39
HNF4AP41235 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HNF4AP41235 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HNF4AP41235 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.37□□□□□ -1.39
HNF4AP41235 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.37□□□□□ -1.39
HNF4AP41235 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HNF4AP41235 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.36□□□□□ -1.39
HNF4AP41235 AL442128.2-201ENST00000620246 1824 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HNF4AP41235 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HNF4AP41235 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HNF4AP41235 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HNF4AP41235 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.36□□□□□ -1.39
HNF4AP41235 AC062029.1-202ENST00000606164 3651 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.36□□□□□ -1.39
HNF4AP41235 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.36□□□□□ -1.39
HNF4AP41235 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HNF4AP41235 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.36□□□□□ -1.39
HNF4AP41235 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.36□□□□□ -1.39
HNF4AP41235 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HNF4AP41235 PSMC1P6-201ENST00000477233 1319 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 AC233968.1-201ENST00000611212 1300 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HNF4AP41235 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HNF4AP41235 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
HNF4AP41235 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.36□□□□□ -1.39
HNF4AP41235 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.36□□□□□ -1.39
HNF4AP41235 SNORA7A-201ENST00000384765 139 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.36□□□□□ -1.39
HNF4AP41235 AL353133.1-201ENST00000407695 401 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.36□□□□□ -1.39
HNF4AP41235 AL121578.1-201ENST00000428051 892 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.36□□□□□ -1.39
HNF4AP41235 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.36□□□□□ -1.39
HNF4AP41235 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.36□□□□□ -1.39
HNF4AP41235 AC022080.2-201ENST00000452932 533 ntBASIC6.36□□□□□ -1.39
HNF4AP41235 AC063955.1-201ENST00000462872 685 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms